@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B2_RXRb: (2019-04-25 )
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA

Atome Classification :

(92 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K09_A_5(4N5G)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
?
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




9HF_A_6(5ZQU)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




4 PsiBlast_PDB 82.4183%-139 - C1 -5UAN 7.2 RXRA_HUMAN
1 PsiBlast_PDB 80.2073%-126 - C1 -3DZU 7.2 RXRA_HUMAN
2 PsiBlast_PDB 80.0073%-126 - C1 -3E00 7.7 RXRA_HUMAN
5 PsiBlast_PDB 76.96100%-146 - C1 -1UHL 5.8
103 Blastp_CBE 74.5389%-137 - C1 -4K4J 8.3 ?
64 Blastp_CBE 74.4088%-145 - C1 -3OZJ 2.7 RXRA_HUMAN
97 Blastp_CBE 74.0989%-134 - C1 -4PP3 8.8 RXRA_HUMAN
81 Blastp_CBE 74.0288%-133 - C1 -4RME 9.4 RXRA_HUMAN
101 Blastp_CBE 73.9089%-139 - C1 -4M8E 8.4 RXRA_HUMAN
95 Blastp_CBE 73.8989%-139 - C1 -4RFW 8.1 RXRA_HUMAN
48 Blastp_CBE 73.8787%-134 - C1 -2ZY0 9.2 RXRA_HUMAN
84 Blastp_CBE 73.8188%-133 - C1 -1XDK 7.7 RXRA_MOUSE
98 Blastp_CBE 73.7889%-137 - C1 -4POJ 8.9 RXRA_HUMAN
38 Blastp_CBE 73.7787%-144 - C1 -3R5M 6.6 RXRA_HUMAN
83 Blastp_CBE 73.6388%-134 - C1 -1XDK 7.6 RXRA_MOUSE
99 Blastp_CBE 73.5189%-138 - C1 -4POH 8.2 RXRA_HUMAN
37 Blastp_CBE 73.5187%-133 - C1 -4ZSH 8.1 RXRA_HUMAN
82 Blastp_CBE 73.4988%-132 - C1 -4RMD 9.9 RXRA_HUMAN
94 Blastp_CBE 73.4689%-130 - C1 -4RMC 8.2 RXRA_HUMAN
114 Blastp_CBE 73.4589%-141 - C1 -5MJ5 9.6 RXRA_HUMAN
96 Blastp_CBE 73.3789%-133 - C1 -4PP5 8.9 RXRA_HUMAN
104 Blastp_CBE 73.3589%-132 - C1 -3OAP 7.7 RXRA_HUMAN
65 Blastp_CBE 73.3388%-134 - C1 -3OZJ 4.1 RXRA_HUMAN
77 Blastp_CBE 73.2488%-114 - C1 -1XVP 5.8 RXRA_HUMAN
50 Blastp_CBE 73.2287%-143 - C1 -2ZXZ 9.3 RXRA_HUMAN
113 Blastp_CBE 73.1589%-134 - C1 -5MK4 9.2 RXRA_HUMAN
14 PsiBlast_PDB 73.1286%-137 - C1 -4OC7 7.5 RXRA_HUMAN
115 Blastp_CBE 73.0887%-138 - C1 -1DKF 7.3 RXRA_MOUSE
102 Blastp_CBE 73.0689%-134 - C1 -4K6I 9.4 ?
49 Blastp_CBE 73.0387%-132 - C1 -2ZY0 9.1 RXRA_HUMAN
39 Blastp_CBE 72.9587%-133 - C1 -3R5M 7.2 RXRA_HUMAN
111 Blastp_CBE 72.6989%-138 - C1 -5MMW 8.1
100 Blastp_CBE 72.6289%-135 - C1 -4M8H 8.2 RXRA_HUMAN
73 Blastp_CBE 72.4588%-114 - C1 -1FM9 8.7 RXRA_HUMAN
70 Blastp_CBE 72.2288%-112 - C1 -1K74 7.8 RXRA_HUMAN
79 Blastp_CBE 72.1588%-112 - C1 -1XV9 5.4 RXRA_HUMAN
80 Blastp_CBE 71.5488%-108 - C1 -1XV9 6.0 RXRA_HUMAN
75 Blastp_CBE 71.2788%-118 - C1 -1FM6 8.1 RXRA_HUMAN
57 Blastp_CBE 71.1487%-129 - C1 -1MZN 9.8 RXRA_HUMAN
78 Blastp_CBE 70.8288%-106 - C1 -1XVP 5.4 RXRA_HUMAN
55 Blastp_CBE 70.5087%-129 - C1 -1MZN 9.9 RXRA_HUMAN
74 Blastp_CBE 69.9488%-115 - C1 -1FM6 8.5 RXRA_HUMAN
58 Blastp_CBE 69.4387%-136 - C1 -1MVC 10.2 RXRA_HUMAN
93 Blastp_CBE 69.1589%-127 - C1 -5Z12 7.4 RXRA_HUMAN
109 Blastp_CBE 69.0189%-144 - C1 -5MKJ 8.6 RXRA_HUMAN
110 Blastp_CBE 68.9589%-144 - C1 -3PCU 4.7 RXRA_HUMAN
20 PsiBlast_PDB 68.7386%-133 - C1 -1MV9 8.8 RXRA_HUMAN
51 Blastp_CBE 68.6987%-140 - C1 -2P1V 10.3 RXRA_HUMAN
36 Blastp_CBE 68.5987%-136 - C1 -5LYQ 10.6 RXRA_HUMAN
52 Blastp_CBE 68.5587%-148 - C1 -2P1U 10.1 RXRA_HUMAN
56 Blastp_CBE 68.5087%-135 - C1 -1MZN 9.8 RXRA_HUMAN
53 Blastp_CBE 68.4087%-144 - C1 -2P1T 9.7 RXRA_HUMAN
62 Blastp_CBE 68.2888%-131 - C1 -6A5Z 8.6 ?
61 Blastp_CBE 68.2788%-144 - C1 -6A5Z 9.0 ?
112 Blastp_CBE 68.2689%-130 - C1 -5MK4 9.3 ?
54 Blastp_CBE 68.2587%-132 - C1 -1MZN 9.8 RXRA_HUMAN
71 Blastp_CBE 68.2188%-129 - C1 -1G5Y 6.3 RXRA_HUMAN
11 PsiBlast_PDB 68.1987%-132 - C1 -3UVV 7.9 RXRA_HUMAN
47 Blastp_CBE 68.0987%-140 - C1 -3FUG 9.7 RXRA_HUMAN
117 Blastp_CBE 67.8785%-143 * C1 *5EC9 10.2 ?
12 PsiBlast_PDB 67.7087%-139 - C1 -1RDT 9.8 RXRA_HUMAN
9 PsiBlast_PDB 67.69100%-161 - C1 -1H9U 9.8 RXRB_HUMAN
15 PsiBlast_PDB 67.5286%-141 - C1 -3E94 5.8 RXRA_HUMAN
85 Blastp_CBE 67.1386%-124 - C1 -5JI0 7.0 RXRA_HUMAN
24 Blastp_CBE 66.88100%-157 - C1 -1H9U 9.9 RXRB_HUMAN
22 Blastp_CBE 66.81100%-155 - C1 -1H9U 9.6
63 Blastp_CBE 66.7888%-139 - C1 -6A5Y 8.7 ?
16 PsiBlast_PDB 66.7486%-144 - C1 -3KWY 7.5 RXRA_HUMAN
72 Blastp_CBE 66.6288%-119 - C1 -1G5Y 6.6 RXRA_HUMAN
23 Blastp_CBE 66.39100%-157 - C1 -1H9U 9.5 RXRB_HUMAN
60 Blastp_CBE 66.0587%-120 - C1 -1FBY 8.0 RXRA_HUMAN
59 Blastp_CBE 65.5287%-124 - C1 -1FBY 8.1 RXRA_HUMAN
92 Blastp_CBE 65.3089%-141 - C1 -5Z12 8.0 RXRA_HUMAN
33 Blastp_CBE 65.1187%-159 - C1 -4N8R Error ?
118 Blastp_CBE 65.0978%-115 - C1 -1XIU 8.3 RXR_BIOGL
35 Blastp_CBE 65.0087%-147 - C1 -4N5G Error ?
116 Blastp_CBE 63.5789%-114 - C1 -3H0A 8.2
27 Blastp_CBE 63.1086%-155 - C1 -5ZQU 7.8 ?
28 Blastp_CBE 63.0586%-150 - C1 -5ZQU 3.5 ?
32 Blastp_CBE 62.9087%-163 - C1 -4N8R Error ?
76 Blastp_CBE 62.4487%-116 - C1 -3A9E 9.2 RXRA_MOUSE
119 Blastp_CBE 62.0878%-125 - C1 -1XIU 8.2 RXR_BIOGL
31 Blastp_CBE 61.3687%-162 - C1 -4N8R 8.0 ?
13 PsiBlast_PDB 61.3686%-159 - C1 -5ZQU 3.9 ?
43 Blastp_CBE 61.0487%-119 - C1 -3R2A 3.7 RXRA_HUMAN
25 Blastp_CBE 60.6888%-124 - C1 -3FC6 7.9 RXRA_HUMAN
17 PsiBlast_PDB 60.5386%-164 - C1 -4N5G 8.4 RXRA_HUMAN
18 PsiBlast_PDB 60.1086%-153 - C1 -4N8R 8.2 RXRA_HUMAN
34 Blastp_CBE 59.7287%-158 - C1 -4N5G 8.2 ?
26 Blastp_CBE 59.0586%-159 - C1 -5ZQU 4.1 ?
121 Blastp_CBE 58.9076%-157 - C1 -4OZT 2.9 ?
41 Blastp_CBE 58.2387%-130 - C1 -3R2A 3.8 RXRA_HUMAN