@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B1_ERRa: (2019-04-25 )
MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TXF_D_9(2EWP)
ERR3_HUMAN
[Raw transfer]




1OH_A_2(2ZAS)
ERR3_HUMAN
[Raw transfer]




OHT_A_2(2GPU)

[Raw transfer]




TXF_C_8(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




047_B_4(2PJL)
ERR1_HUMAN
[Raw transfer]




OHT_D_4(1VJB)
ERR3_HUMAN
[Raw transfer]




047_A_3(2PJL)
ERR1_HUMAN
[Raw transfer]




OHT_A_2(2P7Z)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




90C_A_4(5YSO)
ERR3_HUMAN
[Raw transfer]




OHT_C_3(1VJB)
ERR3_HUMAN
[Raw transfer]




DES_H_8(1S9P)

[Raw transfer]




BPZ_A_2(2ZKC)
ERR3_HUMAN
[Raw transfer]




TXF_E_10(2EWP)

[Raw transfer]




90C_B_5(5YSO)
ERR3_HUMAN
[Raw transfer]




2OH_A_3(2P7G)
ERR3_HUMAN
[Raw transfer]




TXF_B_7(2EWP)
ERR3_HUMAN
[Raw transfer]




90C_C_6(5YSO)

[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




43M_A_2(2P7A)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_F_6(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_G_7(1S9P)
ERR3_MOUSE
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




CHD_E_5(1S9Q)
ERR3_MOUSE
[Raw transfer]




1 PsiBlast_PDB 65.44100%-152 - C1 -3K6P 6.9 ERR1_HUMAN
42 Blastp_CBE 56.0763%-139 - C1 -2ZAS 6.9 ERR3_HUMAN
17 PsiBlast_PDB 54.9562%-137 - C1 -2P7A 4.2 ERR3_HUMAN
26 Blastp_CBE 53.1363%-137 - C1 -2EWP 9.0 ERR3_HUMAN
25 Blastp_CBE 52.4263%-133 - C1 -2EWP 8.8 ERR3_HUMAN
13 PsiBlast_PDB 50.8062%-136 - C1 -2EWP 8.1 ERR3_HUMAN
20 PsiBlast_PDB 50.4662%-133 - C1 -2E2R 6.9 ERR3_HUMAN
24 Blastp_CBE 49.8863%-138 - C1 -2EWP 7.4 ERR3_HUMAN
18 PsiBlast_PDB 49.8562%-137 - C1 -2P7G 6.8 ERR3_HUMAN
9 PsiBlast_PDB 49.4362%-135 - C1 -2GPP 7.7 ERR3_HUMAN
41 Blastp_CBE 47.5463%-131 - C1 -2ZKC 8.4 ERR3_HUMAN
27 Blastp_CBE 47.0863%-128 - C1 -1S9P 7.1
38 Blastp_CBE 45.0963%-127 - C1 -5YSO 9.4 ERR3_HUMAN
10 PsiBlast_PDB 44.1862%-138 - C1 -2GPU 7.9
5 PsiBlast_PDB 42.9762%-139 - C1 -5YSO 7.7 ERR3_HUMAN
22 Blastp_CBE 42.9299%-149 - C1 -2PJL 9.3 ERR1_HUMAN
3 PsiBlast_PDB 41.3199%-151 - C1 -2PJL 9.4 ERR1_HUMAN
29 Blastp_CBE 39.1063%-128 - C1 -1S9P 6.8 ERR3_MOUSE
14 PsiBlast_PDB 38.4362%-132 - C1 -1S9Q 3.9 ERR3_MOUSE
28 Blastp_CBE 31.4163%-125 - C1 -1S9P 5.8 ERR3_MOUSE
12 PsiBlast_PDB 24.4762%-122 - C1 -1S9P 7.0 ERR3_MOUSE
23 Blastp_CBE 21.7563%-146 - C1 -2EWP 8.0
15 PsiBlast_PDB 15.7562%-132 - C1 -1VJB 6.9 ERR3_HUMAN
37 Blastp_CBE 15.6963%-129 * C1 *5YSO 7.0
39 Blastp_CBE 14.6463%-124 - C1 -1VJB 7.3 ERR3_HUMAN
19 PsiBlast_PDB 13.0062%-127 - C1 -2P7Z 8.0 ERR3_HUMAN