@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B2_ERRb: (2019-04-25 )
MSSDDRHLGSSCGSFIKTEPSSPSSGIDALSHHSPSGSSDASGGFGLALGTHANGLDSPPMFAGAGLGGTPCRKSYEDCASGIMEDSAIKCEYMLNAIPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEMLEAKAWARADSLQEWRPLEQVPSPLHRATKRQHVHFLTPLPPPPSVAWVGTAQAGYHLEVFLPQRAGWPRAA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OHT_A_2(2GPU)

[Raw transfer]




TXF_C_8(2EWP)
ERR3_HUMAN
[Raw transfer]




OHT_C_3(1VJB)
ERR3_HUMAN
[Raw transfer]




1OH_A_2(2ZAS)
ERR3_HUMAN
[Raw transfer]




90C_A_4(5YSO)
ERR3_HUMAN
[Raw transfer]




TXF_E_10(2EWP)

[Raw transfer]




OHT_D_4(1VJB)
ERR3_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




OHT_A_2(2P7Z)
ERR3_HUMAN
[Raw transfer]




2OH_A_3(2P7G)
ERR3_HUMAN
[Raw transfer]




TXF_D_9(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_B_7(2EWP)
ERR3_HUMAN
[Raw transfer]




90C_B_5(5YSO)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




BPZ_A_2(2ZKC)
ERR3_HUMAN
[Raw transfer]




90C_C_6(5YSO)

[Raw transfer]




DES_H_8(1S9P)

[Raw transfer]




047_A_3(2PJL)
ERR1_HUMAN
[Raw transfer]




047_B_4(2PJL)
ERR1_HUMAN
[Raw transfer]




43M_A_2(2P7A)
ERR3_HUMAN
[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_F_6(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_G_7(1S9P)
ERR3_MOUSE
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




CHD_E_5(1S9Q)
ERR3_MOUSE
[Raw transfer]




2 PsiBlast_PDB 89.2976%-135 - C1 -2ZAS 6.2 ERR3_HUMAN
15 PsiBlast_PDB 81.5179%-138 - C1 -2P7G 5.6 ERR3_HUMAN
1 PsiBlast_PDB 80.4276%-130 - C1 -2E2R 5.8 ERR3_HUMAN
4 PsiBlast_PDB 78.9576%-127 - C1 -2ZKC 6.9 ERR3_HUMAN
38 Blastp_CBE 76.9979%-137 - C1 -2EWP 7.6 ERR3_HUMAN
9 PsiBlast_PDB 76.4379%-134 - C1 -2GPP 7.0 ERR3_HUMAN
14 PsiBlast_PDB 76.1979%-135 - C1 -2P7A 4.1 ERR3_HUMAN
19 PsiBlast_PDB 75.9278%-136 - C1 -2EWP 7.1 ERR3_HUMAN
36 Blastp_CBE 74.0579%-138 - C1 -2EWP 7.2 ERR3_HUMAN
10 PsiBlast_PDB 71.5979%-139 - C1 -2GPU 8.8
37 Blastp_CBE 67.6379%-132 - C1 -2EWP 7.8 ERR3_HUMAN
32 Blastp_CBE 66.3479%-127 - C1 -1S9P 6.8
5 PsiBlast_PDB 65.3177%-137 - C1 -5YSO 9.1 ERR3_HUMAN
22 Blastp_CBE 64.9578%-126 * C1 *5YSO 8.8 ERR3_HUMAN
34 Blastp_CBE 62.3379%-128 - C1 -1S9P 6.4 ERR3_MOUSE
35 Blastp_CBE 62.1979%-145 - C1 -2EWP 7.1
17 PsiBlast_PDB 59.7579%-129 - C1 -1S9Q 4.4 ERR3_MOUSE
33 Blastp_CBE 52.7679%-126 - C1 -1S9P 6.5 ERR3_MOUSE
18 PsiBlast_PDB 50.6578%-122 - C1 -1S9P 6.6 ERR3_MOUSE
30 Blastp_CBE 47.3779%-128 - C1 -1VJB 7.2 ERR3_HUMAN
16 PsiBlast_PDB 45.2879%-125 - C1 -2P7Z 7.7 ERR3_HUMAN
12 PsiBlast_PDB 40.6679%-132 - C1 -1VJB 7.7 ERR3_HUMAN
21 Blastp_CBE 39.4378%-129 - C1 -5YSO 9.2
40 Blastp_CBE 24.7763%-122 - C1 -3K6P 6.0 ERR1_HUMAN
42 Blastp_CBE 17.0663%-120 - C1 -2PJL 8.6 ERR1_HUMAN
43 Blastp_CBE 11.8463%-117 - C1 -2PJL 8.6 ERR1_HUMAN