@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3C2_MCR: (2019-04-25 )
METKGYHSLPEGLDMERRWGQVSQAVERSSLGPTERTDENNYMEIVNVSCVSGAIPNNSTQGSSKEKQELLPCLQQDNNRPGILTSDIKTELESKELSATVAESMGLYMDSVRDADYSYEQQNQQGSMSPAKIYQNVEQLVKFYKGNGHRPSTLSCVNTPLRSFMSDSGSSVNGGVMRAIVKSPIMCHEKSPSVCSPLNMTSSVCSPAGINSVSSTTASFGSFPVHSPITQGTPLTCSPNAENRGSRSHSPAHASNVGSPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPVNNAFSYTASGTSAGSSTLRDVVPSPDTQEKGAQEVPFPKTEEVESAISNGVTGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSSFSVPIKQESTKHSCSGTSFKGNPTVNPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPVGIKQEPDDGSYYPEASIPSSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHGDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQSPEEGTTYIAPAKEPSVNTALVPQLSTISRALTPSPVMVLENIEPEIVYAGYDSSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTIMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPNNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESHALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C0R_C_3(2A3I)

[Raw transfer]




EYN_A_4(6GGG)
?
[Raw transfer]




CV7_A_6(4UDB)

[Raw transfer]




1CA_D_4(1Y9R)

[Raw transfer]




1CA_E_5(2ABI)
MCR_HUMAN
[Raw transfer]




AS4_D_4(2AA2)

[Raw transfer]




60R_A_4(5HCV)
MCR_HUMAN
[Raw transfer]




1CA_C_3(1Y9R)
MCR_HUMAN
[Raw transfer]




1CA_C_3(2AA7)

[Raw transfer]




1CA_D_4(2ABI)
MCR_HUMAN
[Raw transfer]




DEX_A_4(4UDA)

[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




1TA_B_6(5UFS)
?
[Raw transfer]




1CA_F_6(2ABI)

[Raw transfer]




1TA_A_5(5UFS)
?
[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




SNL_A_4(2AB2)
MCR_HUMAN
[Raw transfer]




1CA_B_7(3RY9)
?
[Raw transfer]




EY8_A_4(6GG8)
?
[Raw transfer]




WFG_A_2(3WFG)

[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




STR_B_4(2AA6)

[Raw transfer]




DEX_B_6(3GN8)
?
[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




HFN_A_2(4PF3)

[Raw transfer]




STR_A_3(2AA6)
MCR_HUMAN
[Raw transfer]




STR_F_6(1YA3)

[Raw transfer]




STR_D_4(1YA3)
MCR_HUMAN
[Raw transfer]




STR_A_3(2AA5)
MCR_HUMAN
[Raw transfer]




STR_B_4(2AA5)

[Raw transfer]




WFF_A_2(3WFF)

[Raw transfer]




6Q0_A_8(5L7E)

[Raw transfer]




STR_B_9(4FN9)
?
[Raw transfer]




6QE_A_4(5L7G)

[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




SNL_B_5(2AB2)

[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




STR_E_5(1YA3)
MCR_HUMAN
[Raw transfer]




MOF_B_7(4E2J)
?
[Raw transfer]




LD2_A_3(3VHV)

[Raw transfer]




486_A_4(4LTW)
?
[Raw transfer]




22 Blastp_CBE 84.5999%-139 - C1 -2AB2 7.7
24 Blastp_CBE 84.3899%-137 - C1 -2AA6 8.2
4 PsiBlast_PDB 83.4599%-136 - C1 -2AA6 8.2 MCR_HUMAN
11 PsiBlast_PDB 83.1998%-139 - C1 -3VHV 8.8
7 PsiBlast_PDB 82.3599%-140 - C1 -3VHU 9.6
3 PsiBlast_PDB 81.9699%-136 - C1 -2AA7 8.6
1 PsiBlast_PDB 81.6899%-138 - C1 -2AA2 8.7
12 PsiBlast_PDB 81.4099%-159 - C1 -2ABI 8.8 MCR_HUMAN
6 PsiBlast_PDB 81.0499%-131 - C1 -2AB2 7.4 MCR_HUMAN
21 Blastp_CBE 80.2799%-135 - C1 -2AA5 8.0
18 PsiBlast_PDB 79.6099%-147 - C1 -4UDA 8.8
2 PsiBlast_PDB 79.4099%-129 - C1 -2AA5 8.0 MCR_HUMAN
15 PsiBlast_PDB 79.3099%-154 - C1 -1YA3 7.8 MCR_HUMAN
13 PsiBlast_PDB 79.2999%-131 - C1 -2A3I 8.9
28 Blastp_CBE 78.7699%-154 - C1 -1YA3 7.7 MCR_HUMAN
37 Blastp_CBE 78.0699%-141 - C1 -5L7E 6.7
8 PsiBlast_PDB 77.9198%-123 - C1 -3WFF 7.2
14 PsiBlast_PDB 77.6099%-149 - C1 -1Y9R 7.8 MCR_HUMAN
27 Blastp_CBE 77.4599%-150 - C1 -1YA3 6.8
26 Blastp_CBE 77.0799%-145 - C1 -2ABI 8.8 MCR_HUMAN
20 PsiBlast_PDB 76.8298%-134 - C1 -4UDB 10.8
29 Blastp_CBE 76.7899%-143 - C1 -1Y9R 8.5
25 Blastp_CBE 76.4699%-146 - C1 -2ABI 8.1
10 PsiBlast_PDB 76.0598%-125 - C1 -4PF3 9.1
35 Blastp_CBE 75.8099%-140 - C1 -6GGG 10.2 ?
36 Blastp_CBE 75.4799%-131 - C1 -5L7G 7.9
19 PsiBlast_PDB 75.3999%-135 - C1 -6GG8 8.0 ?
9 PsiBlast_PDB 75.3798%-123 - C1 -3WFG 7.8
17 PsiBlast_PDB 74.8399%-140 - C1 -5HCV 9.9 MCR_HUMAN
39 Blastp_CBE 74.8275%-152 - C1 -2Q1H 8.5 ?
48 Blastp_CBE 73.7763%-150 - C1 -4E2J 8.3 ?
49 Blastp_CBE 73.3163%-147 * C1 *5UFS 6.5 ?
47 Blastp_CBE 73.2263%-149 - C1 -4E2J 8.1 ?
50 Blastp_CBE 72.7863%-146 - C1 -5UFS 6.6 ?
45 Blastp_CBE 71.5963%-146 - C1 -3GN8 7.6 ?
41 Blastp_CBE 71.2070%-141 - C1 -3RY9 8.7 ?
46 Blastp_CBE 71.0363%-146 - C1 -3GN8 7.3 ?
42 Blastp_CBE 70.4970%-139 - C1 -3RY9 8.6 ?
40 Blastp_CBE 70.3971%-142 - C1 -4LTW 6.0 ?
44 Blastp_CBE 66.4871%-136 - C1 -4FN9 7.8 ?
43 Blastp_CBE 66.4271%-138 - C1 -4FN9 7.4 ?