@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B2_RXRb: (2019-08-20 )
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA

Atome Classification :

(97 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
?
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
?
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




9CR_D_6(6A60)
RXRA_HUMAN
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]




J57_A_3(5MKU)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




REA_A_5(3FC6)
RXRA_HUMAN
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FAL)
RXRA_HUMAN
[Raw transfer]




REA_A_5(3FAL)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




9HF_A_6(5ZQU)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




4 PsiBlast_PDB 83.1983%-139 - C1 -5UAN 7.2 RXRA_HUMAN
1 PsiBlast_PDB 80.2173%-126 - C1 -3DZU 7.2 RXRA_HUMAN
2 PsiBlast_PDB 80.0173%-126 - C1 -3E00 7.7 RXRA_HUMAN
5 PsiBlast_PDB 76.97100%-146 - C1 -1UHL 5.8
114 Blastp_CBE 74.5489%-137 - C1 -4K4J 8.3 ?
71 Blastp_CBE 74.4188%-145 - C1 -3OZJ 2.7 RXRA_HUMAN
108 Blastp_CBE 74.1089%-134 - C1 -4PP3 8.8 RXRA_HUMAN
88 Blastp_CBE 74.0388%-133 - C1 -4RME 9.4 RXRA_HUMAN
112 Blastp_CBE 73.9189%-139 - C1 -4M8E 8.4 RXRA_HUMAN
106 Blastp_CBE 73.9089%-139 - C1 -4RFW 8.1 RXRA_HUMAN
53 Blastp_CBE 73.8887%-134 - C1 -2ZY0 9.2 RXRA_HUMAN
91 Blastp_CBE 73.8288%-133 - C1 -1XDK 7.7 RXRA_MOUSE
109 Blastp_CBE 73.7989%-137 - C1 -4POJ 8.9 RXRA_HUMAN
43 Blastp_CBE 73.7887%-144 - C1 -3R5M 6.6 RXRA_HUMAN
90 Blastp_CBE 73.6488%-134 - C1 -1XDK 7.6 RXRA_MOUSE
110 Blastp_CBE 73.5289%-138 - C1 -4POH 8.2 RXRA_HUMAN
42 Blastp_CBE 73.5287%-133 - C1 -4ZSH 8.1 RXRA_HUMAN
89 Blastp_CBE 73.5088%-132 - C1 -4RMD 9.9 RXRA_HUMAN
105 Blastp_CBE 73.4889%-130 - C1 -4RMC 8.2 RXRA_HUMAN
125 Blastp_CBE 73.4689%-141 - C1 -5MJ5 9.6 RXRA_HUMAN
107 Blastp_CBE 73.3889%-133 - C1 -4PP5 8.9 RXRA_HUMAN
115 Blastp_CBE 73.3689%-132 - C1 -3OAP 7.7 RXRA_HUMAN
72 Blastp_CBE 73.3488%-134 - C1 -3OZJ 4.1 RXRA_HUMAN
84 Blastp_CBE 73.2588%-114 - C1 -1XVP 5.8 RXRA_HUMAN
55 Blastp_CBE 73.2387%-143 - C1 -2ZXZ 9.3 RXRA_HUMAN
124 Blastp_CBE 73.1789%-134 - C1 -5MK4 9.2 RXRA_HUMAN
17 PsiBlast_PDB 73.1386%-137 - C1 -4OC7 7.5 RXRA_HUMAN
126 Blastp_CBE 73.1187%-138 - C1 -1DKF 7.3 RXRA_MOUSE
113 Blastp_CBE 73.0789%-134 - C1 -4K6I 9.4 ?
54 Blastp_CBE 73.0487%-132 - C1 -2ZY0 9.1 RXRA_HUMAN
44 Blastp_CBE 72.9687%-133 - C1 -3R5M 7.2 RXRA_HUMAN
122 Blastp_CBE 72.7089%-138 - C1 -5MMW 8.1
111 Blastp_CBE 72.6389%-135 - C1 -4M8H 8.2 RXRA_HUMAN
80 Blastp_CBE 72.4688%-114 - C1 -1FM9 8.7 RXRA_HUMAN
77 Blastp_CBE 72.2288%-112 - C1 -1K74 7.8 RXRA_HUMAN
86 Blastp_CBE 72.1588%-112 - C1 -1XV9 5.4 RXRA_HUMAN
87 Blastp_CBE 71.5488%-108 - C1 -1XV9 6.0 RXRA_HUMAN
82 Blastp_CBE 71.2888%-118 - C1 -1FM6 8.1 RXRA_HUMAN
62 Blastp_CBE 71.1587%-129 - C1 -1MZN 9.8 RXRA_HUMAN
85 Blastp_CBE 70.8288%-106 - C1 -1XVP 5.4 RXRA_HUMAN
60 Blastp_CBE 70.5087%-129 - C1 -1MZN 9.9 RXRA_HUMAN
81 Blastp_CBE 69.9488%-115 - C1 -1FM6 8.5 RXRA_HUMAN
63 Blastp_CBE 69.4587%-136 - C1 -1MVC 10.2 RXRA_HUMAN
104 Blastp_CBE 69.1689%-127 - C1 -5Z12 7.4 RXRA_HUMAN
120 Blastp_CBE 69.0389%-144 - C1 -5MKJ 8.6 RXRA_HUMAN
64 Blastp_CBE 68.9787%-133 - C1 -1MV9 8.8 RXRA_HUMAN
121 Blastp_CBE 68.9689%-144 - C1 -3PCU 4.7 RXRA_HUMAN
127 Blastp_CBE 68.8389%-146 - C1 -5MKU 8.3 RXRA_HUMAN
56 Blastp_CBE 68.7187%-140 - C1 -2P1V 10.3 RXRA_HUMAN
41 Blastp_CBE 68.6087%-136 - C1 -5LYQ 10.6 RXRA_HUMAN
57 Blastp_CBE 68.5787%-148 - C1 -2P1U 10.1 RXRA_HUMAN
61 Blastp_CBE 68.5287%-135 - C1 -1MZN 9.8 RXRA_HUMAN
58 Blastp_CBE 68.4187%-144 - C1 -2P1T 9.7 RXRA_HUMAN
67 Blastp_CBE 68.3888%-139 - C1 -6A60 7.7 RXRA_HUMAN
69 Blastp_CBE 68.3088%-131 - C1 -6A5Z 8.6 ?
68 Blastp_CBE 68.2888%-144 - C1 -6A5Z 9.0 ?
123 Blastp_CBE 68.2789%-130 - C1 -5MK4 9.3 ?
59 Blastp_CBE 68.2687%-132 - C1 -1MZN 9.8 RXRA_HUMAN
78 Blastp_CBE 68.2588%-129 - C1 -1G5Y 6.3 RXRA_HUMAN
12 PsiBlast_PDB 68.2087%-132 - C1 -3UVV 7.9 RXRA_HUMAN
52 Blastp_CBE 68.1187%-140 - C1 -3FUG 9.7 RXRA_HUMAN
129 Blastp_CBE 67.8985%-143 * C1 *5EC9 10.2 ?
10 PsiBlast_PDB 67.72100%-161 - C1 -1H9U 9.8 RXRB_HUMAN
13 PsiBlast_PDB 67.7187%-139 - C1 -1RDT 9.8 RXRA_HUMAN
18 PsiBlast_PDB 67.5486%-141 - C1 -3E94 5.8 RXRA_HUMAN
92 Blastp_CBE 67.1586%-124 - C1 -5JI0 7.0 RXRA_HUMAN
25 Blastp_CBE 66.92100%-157 - C1 -1H9U 9.9 RXRB_HUMAN
23 Blastp_CBE 66.84100%-155 - C1 -1H9U 9.6
70 Blastp_CBE 66.8088%-139 - C1 -6A5Y 8.7 ?
19 PsiBlast_PDB 66.7586%-144 - C1 -3KWY 7.5 RXRA_HUMAN
79 Blastp_CBE 66.6688%-119 - C1 -1G5Y 6.6 RXRA_HUMAN
24 Blastp_CBE 66.42100%-157 - C1 -1H9U 9.5 RXRB_HUMAN
66 Blastp_CBE 66.0687%-120 - C1 -1FBY 8.0 RXRA_HUMAN
103 Blastp_CBE 65.6089%-141 - C1 -5Z12 8.0 RXRA_HUMAN
65 Blastp_CBE 65.5487%-124 - C1 -1FBY 8.1 RXRA_HUMAN
37 Blastp_CBE 65.1787%-159 - C1 -4N8R Error ?
130 Blastp_CBE 65.0978%-115 - C1 -1XIU 8.3 RXR_BIOGL
40 Blastp_CBE 65.0687%-147 - C1 -4N5G Error ?
128 Blastp_CBE 63.5889%-114 - C1 -3H0A 8.2
29 Blastp_CBE 63.1686%-155 - C1 -5ZQU 7.8 ?
30 Blastp_CBE 63.1186%-150 - C1 -5ZQU 3.5 ?
36 Blastp_CBE 62.9687%-163 - C1 -4N8R Error ?
83 Blastp_CBE 62.4787%-116 - C1 -3A9E 9.2 RXRA_MOUSE
131 Blastp_CBE 62.1178%-125 - C1 -1XIU 8.2 RXR_BIOGL
14 PsiBlast_PDB 61.7087%-136 - C1 -3FC6 7.6 RXRA_HUMAN
35 Blastp_CBE 61.4187%-162 - C1 -4N8R 8.0 ?
16 PsiBlast_PDB 61.4186%-159 - C1 -5ZQU 3.9 ?
48 Blastp_CBE 61.0687%-119 - C1 -3R2A 3.7 RXRA_HUMAN
26 Blastp_CBE 60.7388%-124 - C1 -3FC6 7.9 RXRA_HUMAN
20 PsiBlast_PDB 60.5986%-164 - C1 -4N5G 8.4 RXRA_HUMAN
27 Blastp_CBE 60.3688%-132 - C1 -3FAL 7.3 RXRA_HUMAN
38 Blastp_CBE 60.3587%-153 - C1 -4N8R 8.2 RXRA_HUMAN
39 Blastp_CBE 59.7787%-158 - C1 -4N5G 8.2 ?
28 Blastp_CBE 59.1086%-159 - C1 -5ZQU 4.1 ?
15 PsiBlast_PDB 59.0287%-127 - C1 -3FAL 6.8 RXRA_HUMAN
133 Blastp_CBE 58.9576%-157 - C1 -4OZT 2.9 ?
46 Blastp_CBE 58.2587%-130 - C1 -3R2A 3.8 RXRA_HUMAN