@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1F2_RORb: (2021-05-27 )
MCENQLKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLSNLNNETSGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNTLFPPLYKELFNPDCATGCK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ARL_A_3(1NQ7)
RORB_RAT
[Raw transfer]



REA_C_3(1N4H)
RORB_RAT
[Raw transfer]



4D8_B_7(4S15)

[Raw transfer]



C3S_B_2(1S0X)

[Raw transfer]



C3S_A_9(5NTI)

[Raw transfer]



CLR_B_2(1N83)

[Raw transfer]



98H_A_9(5NTN)
RORG_HUMAN
[Raw transfer]



4D8_A_3(4S14)

[Raw transfer]



STE_C_3(1K4W)
RORB_RAT
[Raw transfer]



4D8_A_5(4S15)
RORA_HUMAN
[Raw transfer]



98N_A_9(5NTW)

[Raw transfer]



82R_A_9(5X8Q)
RORG_HUMAN
[Raw transfer]



3SN_A_5(4WPF)
RORG_HUMAN
[Raw transfer]



82O_A_9(5X8X)
?
[Raw transfer]



6Q5_A_3(5X8S)
?
[Raw transfer]



4LQ_A_3(5AYG)
RORG_HUMAN
[Raw transfer]



B6L_A_4(6J1L)
RORG_HUMAN
[Raw transfer]



9P6_A_9(6A22)

[Raw transfer]



AYO_A_9(6IVX)
RORG_HUMAN
[Raw transfer]
3 PsiBlast_PDB 98.2698%-161 - C1 -1NQ7 8.1 RORB_RAT
1 PsiBlast_PDB 97.0798%-157 - C1 -1N4H 7.3 RORB_RAT
2 PsiBlast_PDB 96.3398%-160 - C1 -1K4W 6.0 RORB_RAT
4 PsiBlast_PDB 85.2461%-167 - C1 -4S15 8.4 RORA_HUMAN
6 PsiBlast_PDB 84.7161%-165 - C1 -1S0X 9.1
5 PsiBlast_PDB 84.6161%-166 - C1 -1N83 8.1
21 Blastp_CBE 84.2462%-158 * C1 *4S15 8.2
20 PsiBlast_PDB 81.1348%-148 - C1 -5NTW 8.2
18 PsiBlast_PDB 80.7048%-155 - C1 -5NTI 8.4
19 PsiBlast_PDB 79.8248%-152 - C1 -5NTN 7.6 RORG_HUMAN
13 PsiBlast_PDB 79.3348%-156 - C1 -4S14 7.3
14 PsiBlast_PDB 79.0148%-144 - C1 -4WPF 6.5 RORG_HUMAN
17 PsiBlast_PDB 78.0648%-154 - C1 -5X8U - ? -
9 PsiBlast_PDB 77.2448%-154 - C1 -5X8W - ? -
11 PsiBlast_PDB 75.1048%-178 - C1 -6A22 7.4
16 PsiBlast_PDB 74.5648%-165 - C1 -5X8S 7.3 ?
8 PsiBlast_PDB 73.6248%-172 - C1 -5X8Q 7.9 RORG_HUMAN
10 PsiBlast_PDB 73.5548%-176 - C1 -5X8X 9.2 ?
12 PsiBlast_PDB 73.0148%-169 - C1 -6IVX 7.4 RORG_HUMAN
7 PsiBlast_PDB 71.9149%-167 - C1 -6J1L 7.7 RORG_HUMAN
15 PsiBlast_PDB 70.6948%-163 - C1 -5AYG 8.5 RORG_HUMAN