@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1H3_LXRa: (2021-05-27 )
MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE

Atome Classification :

(76 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LX2_B_6(3FC6)
NR1H3_MOUSE
[Raw transfer]



LX2_D_8(3FC6)
NR1H3_MOUSE
[Raw transfer]



965_A_3(3IPQ)
NR1H3_HUMAN
[Raw transfer]



KVB_A_2(6S4T)
NR1H2_HUMAN
[Raw transfer]



4KQ_A_3(5AVL)
NR1H3_HUMAN
[Raw transfer]



4KM_C_6(5AVI)
NR1H3_HUMAN
[Raw transfer]



965_B_6(1PQ6)
NR1H2_HUMAN
[Raw transfer]



965_D_7(1PQ6)
NR1H2_HUMAN
[Raw transfer]



O40_B_6(3IPU)
NR1H3_HUMAN
[Raw transfer]



O40_A_5(3IPU)
NR1H3_HUMAN
[Raw transfer]



444_H_8(1PQC)
NR1H2_HUMAN
[Raw transfer]



965_A_5(1PQ6)
NR1H2_HUMAN
[Raw transfer]



4KM_A_5(5AVI)
NR1H3_HUMAN
[Raw transfer]



44B_H_8(1PQ9)
NR1H2_HUMAN
[Raw transfer]



LO2_B_6(3FAL)
NR1H3_MOUSE
[Raw transfer]



O90_A_6(3IPS)
NR1H3_HUMAN
[Raw transfer]



LO2_D_8(3FAL)
NR1H3_MOUSE
[Raw transfer]



6Y4_E_6(5KYA)
NR1H2_HUMAN
[Raw transfer]



668_A_5(5HJS)
NR1H3_HUMAN
[Raw transfer]



67S_E_6(5I4V)
NCOA2_HUMAN
[Raw transfer]



61X_D_7(3KFC)
NR1H2_HUMAN
[Raw transfer]



668_B_5(5HJP)
NR1H2_HUMAN
[Raw transfer]



67S_A_5(5I4V)
NCOA2_HUMAN
[Raw transfer]



668_B_6(5HJS)
NR1H3_HUMAN
[Raw transfer]



CO1_F_6(1P8D)
NR1H2_HUMAN
[Raw transfer]



6Y4_A_5(5KYA)
NR1H2_HUMAN
[Raw transfer]



CO1_E_5(1P8D)
NR1H2_HUMAN
[Raw transfer]



O90_B_7(3IPS)
NR1H3_HUMAN
[Raw transfer]



61X_B_6(3KFC)
NR1H2_HUMAN
[Raw transfer]



61X_A_5(3KFC)
NR1H2_HUMAN
[Raw transfer]



668_D_8(5HJP)
NR1H2_HUMAN
[Raw transfer]



0KS_C_12(4DK7)
NR1H2_HUMAN
[Raw transfer]



0KS_A_5(4DK7)
NR1H2_HUMAN
[Raw transfer]



6Y8_A_5(5KYJ)
NR1H2_HUMAN
[Raw transfer]



KWE_A_2(6S5K)
NR1H2_HUMAN
[Raw transfer]



KVK_A_4(6S4U)
NR1H2_HUMAN
[Raw transfer]



D3R_A_5(6K9G)
NR1H2_HUMAN
[Raw transfer]



6Y8_E_6(5KYJ)
NR1H2_HUMAN
[Raw transfer]



444_E_5(1UHL)
NR1H3_HUMAN
[Raw transfer]



KVK_B_5(6S4U)
NR1H2_HUMAN
[Raw transfer]



KVK_C_6(6S4U)
NR1H2_HUMAN
[Raw transfer]



652_A_5(4RAK)
NR1H2_HUMAN
[Raw transfer]



652_B_7(4RAK)
NR1H2_HUMAN
[Raw transfer]



6OX_C_8(5JY3)
NR1H2_HUMAN
[Raw transfer]



D3R_D_8(6K9G)
NR1H2_HUMAN
[Raw transfer]



G58_A_3(3L0E)
NR1H2_HUMAN
[Raw transfer]



6OX_D_9(5JY3)
NR1H2_HUMAN
[Raw transfer]



D3R_C_7(6K9G)
NR1H2_HUMAN
[Raw transfer]



D43_D_8(6K9M)
NR1H2_HUMAN
[Raw transfer]



44B_L_12(1PQ9)
NR1H2_HUMAN
[Raw transfer]



444_A_2(1UPW)
NR1H2_HUMAN
[Raw transfer]



444_A_2(1UPV)
NR1H2_HUMAN
[Raw transfer]



444_E_5(1PQC)
NR1H2_HUMAN
[Raw transfer]



KUW_C_12(6S4N)
NR1H2_HUMAN
[Raw transfer]



6OX_B_6(5JY3)
NR1H2_HUMAN
[Raw transfer]



KUW_B_10(6S4N)
NR1H2_HUMAN
[Raw transfer]



KUW_D_5(6S4N)
NR1H2_HUMAN
[Raw transfer]



D43_A_5(6K9M)
NR1H2_HUMAN
[Raw transfer]



444_F_6(1PQC)
NR1H2_HUMAN
[Raw transfer]



444_G_7(1PQC)
NR1H2_HUMAN
[Raw transfer]



D40_A_3(6K9H)
NR1H2_HUMAN
[Raw transfer]



D3R_B_6(6K9G)
NR1H2_HUMAN
[Raw transfer]



D43_C_7(6K9M)
NR1H2_HUMAN
[Raw transfer]



D40_B_4(6K9H)
NR1H2_HUMAN
[Raw transfer]



6OX_A_5(5JY3)
NR1H2_HUMAN
[Raw transfer]



44B_F_6(1PQ9)
NR1H2_HUMAN
[Raw transfer]



44B_J_10(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BQ3_A_5(6JIO)
NR1H2_HUMAN
[Raw transfer]



KUW_A_8(6S4N)
NR1H2_HUMAN
[Raw transfer]



D43_B_6(6K9M)
NR1H2_HUMAN
[Raw transfer]



0KT_A_5(4DK8)
NR1H2_HUMAN
[Raw transfer]



BQ3_D_6(6JIO)
NR1H2_HUMAN
[Raw transfer]



0KT_C_11(4DK8)
NR1H2_HUMAN
[Raw transfer]
25 Blastp_CBE 81.9569% -3 - C1 -4NQA - NR1H2_HUMAN -
7 PsiBlast_PDB 73.1568% 23 - C1 -4NQA - NR1H2_HUMAN (first) -
27 Blastp_CBE 59.6196%-131 - C1 -3FAL 10.0 NR1H3_MOUSE
26 Blastp_CBE 59.2496%-129 - C1 -3FC6 13.1 NR1H3_MOUSE
3 PsiBlast_PDB 57.72100%-133 - C1 -3IPU 8.8 NR1H3_HUMAN
9 PsiBlast_PDB 57.5495%-137 - C1 -3FC6 13.3 NR1H3_MOUSE
10 PsiBlast_PDB 57.4895%-132 - C1 -3FAL 9.7 NR1H3_MOUSE
23 Blastp_CBE 56.56100%-134 - C1 -3IPU 8.9 NR1H3_HUMAN
22 Blastp_CBE 56.31100%-145 - C1 -5AVI 9.5 NR1H3_HUMAN
11 PsiBlast_PDB 56.1398%-118 - C1 -2ACL - NR1H3_MOUSE -
6 PsiBlast_PDB 55.95100%-152 - C1 -5HJS 10.0 NR1H3_HUMAN
4 PsiBlast_PDB 55.92100%-145 - C1 -5AVI 9.5 NR1H3_HUMAN
21 Blastp_CBE 55.05100%-151 - C1 -5HJS 10.2 NR1H3_HUMAN
24 Blastp_CBE 54.35100%-148 - C1 -3IPS 8.8 NR1H3_HUMAN
5 PsiBlast_PDB 51.06100%-150 - C1 -5AVL 11.1 NR1H3_HUMAN
2 PsiBlast_PDB 49.91100%-148 - C1 -3IPS 9.9 NR1H3_HUMAN
31 Blastp_CBE 49.8777%-123 - C1 -1P8D 9.2 NR1H2_HUMAN
61 Blastp_CBE 49.8676%-129 - C1 -5I4V 9.0 NCOA2_HUMAN (first)
76 Blastp_CBE 48.9976%-126 - C1 -5KYA 9.4 NR1H2_HUMAN
18 PsiBlast_PDB 48.9276%-134 - C1 -6S4T 12.3 NR1H2_HUMAN
1 PsiBlast_PDB 47.98100%-146 - C1 -3IPQ 12.6 NR1H3_HUMAN
57 Blastp_CBE 47.6576%-133 - C1 -3L0E 10.4 NR1H2_HUMAN
71 Blastp_CBE 47.6376%-118 - C1 -6K9G 10.8 NR1H2_HUMAN
75 Blastp_CBE 47.3676%-122 - C1 -5KYJ 9.0 NR1H2_HUMAN
50 Blastp_CBE 47.2477%-130 - C1 -1PQ6 12.6 NR1H2_HUMAN
59 Blastp_CBE 46.7976%-140 - C1 -5HJP 10.2 NR1H2_HUMAN
33 Blastp_CBE 46.7377%-141 - C1 -6S4U 6.9 NR1H2_HUMAN
19 PsiBlast_PDB 46.3076%-136 - C1 -6S4U 8.3 NR1H2_HUMAN
12 PsiBlast_PDB 45.8176%-126 - C1 -1P8D 9.1 NR1H2_HUMAN
43 Blastp_CBE 44.8277%-123 - C1 -1PQC 8.6 NR1H2_HUMAN
47 Blastp_CBE 44.8177%-125 - C1 -1PQ9 5.9 NR1H2_HUMAN
37 Blastp_CBE 44.4877%-120 - C1 -6S4N 9.5 NR1H2_HUMAN
60 Blastp_CBE 43.8976%-130 - C1 -5I4V 8.9 NCOA2_HUMAN (first)
17 PsiBlast_PDB 43.7276%-132 - C1 -6S4N 10.7 NR1H2_HUMAN
48 Blastp_CBE 43.6877%-134 - C1 -1PQ9 5.9 NR1H2_HUMAN
72 Blastp_CBE 43.5276%-119 - C1 -6JIO 5.1 NR1H2_HUMAN
62 Blastp_CBE 43.3576%-121 - C1 -6K9M 6.7 NR1H2_HUMAN
39 Blastp_CBE 42.8877%-130 - C1 -3KFC 10.5 NR1H2_HUMAN
77 Blastp_CBE 42.8376%-127 - C1 -5KYA 9.2 NR1H2_HUMAN
40 Blastp_CBE 42.4677%-130 - C1 -3KFC 10.4 NR1H2_HUMAN
20 PsiBlast_PDB 42.3976%-139 - C1 -1PQ6 11.7 NR1H2_HUMAN
56 Blastp_CBE 42.2277%-133 - C1 -4RAK 11.9 NR1H2_HUMAN
58 Blastp_CBE 42.1876%-133 - C1 -5HJP 10.0 NR1H2_HUMAN
44 Blastp_CBE 42.1677%-133 - C1 -1PQC 8.1 NR1H2_HUMAN
36 Blastp_CBE 41.9777%-138 - C1 -6S4N 10.4 NR1H2_HUMAN
74 Blastp_CBE 41.3176%-122 - C1 -5KYJ 8.8 NR1H2_HUMAN
64 Blastp_CBE 41.2076%-135 - C1 -6K9M 7.5 NR1H2_HUMAN
34 Blastp_CBE 41.0277%-133 - C1 -6S4U 8.6 NR1H2_HUMAN
55 Blastp_CBE 40.8877%-134 - C1 -5JY3 11.6 NR1H2_HUMAN
38 Blastp_CBE 40.7877%-129 - C1 -3KFC 9.6 NR1H2_HUMAN
52 Blastp_CBE 40.4477%-130 - C1 -4DK8 9.1 NR1H2_HUMAN
42 Blastp_CBE 40.0777%-130 - C1 -1PQC 8.2 NR1H2_HUMAN
68 Blastp_CBE 39.3576%-140 - C1 -6K9G 10.8 NR1H2_HUMAN
46 Blastp_CBE 39.2777%-125 - C1 -1PQ9 5.8 NR1H2_HUMAN
65 Blastp_CBE 39.0976%-126 - C1 -6K9M 7.0 NR1H2_HUMAN
73 Blastp_CBE 38.9776%-126 - C1 -6JIO 5.5 NR1H2_HUMAN
15 PsiBlast_PDB 38.4576%-136 - C1 -1UPV 6.6 NR1H2_HUMAN
53 Blastp_CBE 37.9477%-131 - C1 -5JY3 11.7 NR1H2_HUMAN
16 PsiBlast_PDB 37.9176%-128 - C1 -1UPW 6.1 NR1H2_HUMAN
8 PsiBlast_PDB 37.9199%-137 - C1 -1UHL 6.2 NR1H3_HUMAN
49 Blastp_CBE 37.6177%-151 - C1 -1PQ6 11.9 NR1H2_HUMAN
51 Blastp_CBE 36.9577%-136 - C1 -4DK8 8.7 NR1H2_HUMAN
63 Blastp_CBE 36.6476%-118 - C1 -6K9M 6.4 NR1H2_HUMAN
70 Blastp_CBE 36.6376%-130 - C1 -6K9G 10.7 NR1H2_HUMAN
45 Blastp_CBE 36.2677%-152 - C1 -1PQ9 6.0 NR1H2_HUMAN
35 Blastp_CBE 35.8777%-130 - C1 -6S4N 11.0 NR1H2_HUMAN
41 Blastp_CBE 35.6577%-151 - C1 -1PQC 3.3 NR1H2_HUMAN
32 Blastp_CBE 34.8577%-134 - C1 -6S5K 11.0 NR1H2_HUMAN
69 Blastp_CBE 34.4476%-147 - C1 -6K9G 10.7 NR1H2_HUMAN
66 Blastp_CBE 33.0176%-143 - C1 -6K9H 7.6 NR1H2_HUMAN
79 Blastp_CBE 32.7876%-138 - C1 -4DK7 6.9 NR1H2_HUMAN
67 Blastp_CBE 32.4676%-131 - C1 -6K9H 8.3 NR1H2_HUMAN
13 PsiBlast_PDB 30.4776%-120 - C1 -4RAK 10.1 NR1H2_HUMAN
78 Blastp_CBE 30.1476%-139 * C1 *4DK7 7.1 NR1H2_HUMAN
14 PsiBlast_PDB 28.9976%-130 - C1 -5JY3 10.6 NR1H2_HUMAN
54 Blastp_CBE 28.6377%-127 - C1 -5JY3 11.3 NR1H2_HUMAN