@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1H4_FXR: (2021-05-27 )
MVMQFQGLENPIQISPHCSCTPSGFFMEMMSMKPAKGVLTEQVAGPLGQNLEVEPYSQYSNVQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETEVAEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLRQVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ

Atome Classification :

(130 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OMK_A_5(3OMK)
NR1H4_HUMAN
[Raw transfer]




9ND_A_5(5Q1D)
NR1H4_HUMAN
[Raw transfer]




9LS_A_5(5Q0V)
NR1H4_HUMAN
[Raw transfer]




9LS_C_6(5Q0V)

[Raw transfer]




OOF_C_6(3OOF)

[Raw transfer]




9ND_C_6(5Q1D)

[Raw transfer]




OMK_C_6(3OMK)

[Raw transfer]




OOK_A_5(3OOK)
NR1H4_HUMAN
[Raw transfer]




9MP_C_6(5Q15)

[Raw transfer]




9LP_A_5(5Q0U)
NR1H4_HUMAN
[Raw transfer]




9MY_A_5(5Q18)
NR1H4_HUMAN
[Raw transfer]




OOF_A_5(3OOF)
NR1H4_HUMAN
[Raw transfer]




9MP_A_5(5Q15)
NR1H4_HUMAN
[Raw transfer]




9LJ_A_5(5Q0S)
NR1H4_HUMAN
[Raw transfer]




9MS_C_6(5Q16)

[Raw transfer]




9MM_A_5(5Q14)
NR1H4_HUMAN
[Raw transfer]




9LA_A_5(5Q0P)
NR1H4_HUMAN
[Raw transfer]




9LA_C_6(5Q0P)

[Raw transfer]




9L4_C_6(5Q0N)

[Raw transfer]




OOK_C_6(3OOK)

[Raw transfer]




9MY_C_6(5Q18)

[Raw transfer]




9LP_C_6(5Q0U)

[Raw transfer]




9LJ_C_6(5Q0S)

[Raw transfer]




9MS_A_5(5Q16)
NR1H4_HUMAN
[Raw transfer]




9LY_C_6(5Q0Y)

[Raw transfer]




OMM_C_6(3OMM)

[Raw transfer]




9N7_A_5(5Q1B)
NR1H4_HUMAN
[Raw transfer]




OLF_A_5(3OLF)
NR1H4_HUMAN
[Raw transfer]




9L4_A_5(5Q0N)
NR1H4_HUMAN
[Raw transfer]




OMM_A_5(3OMM)
NR1H4_HUMAN
[Raw transfer]




9R3_H_11(6A5Z)

[Raw transfer]




9NA_A_5(5Q1C)
NR1H4_HUMAN
[Raw transfer]




9LY_A_5(5Q0Y)
NR1H4_HUMAN
[Raw transfer]




9KV_A_5(5Q0J)
NR1H4_HUMAN
[Raw transfer]




9MD_C_6(5Q13)

[Raw transfer]




OKI_A_5(3OKI)
NR1H4_HUMAN
[Raw transfer]




9KV_C_6(5Q0J)

[Raw transfer]




OLF_C_6(3OLF)

[Raw transfer]




9N7_C_6(5Q1B)

[Raw transfer]




9NJ_C_6(5Q1F)

[Raw transfer]




OKI_C_6(3OKI)

[Raw transfer]




9MM_C_6(5Q14)

[Raw transfer]




9NA_C_6(5Q1C)

[Raw transfer]




9NJ_A_5(5Q1F)
NR1H4_HUMAN
[Raw transfer]




9MD_A_5(5Q13)
NR1H4_HUMAN
[Raw transfer]




9KY_A_5(5Q0L)
NR1H4_HUMAN
[Raw transfer]




9L7_C_7(5Q0O)

[Raw transfer]




9NP_A_9(5Q1H)
NR1H4_HUMAN
[Raw transfer]




9N4_A_5(5Q1A)
NR1H4_HUMAN
[Raw transfer]




9N1_C_6(5Q19)

[Raw transfer]




9L7_A_6(5Q0O)
NR1H4_HUMAN
[Raw transfer]




9M1_C_6(5Q0Z)

[Raw transfer]




9NP_C_10(5Q1H)
NR1H4_HUMAN
[Raw transfer]




OKH_A_4(3OKH)

[Raw transfer]




9NP_G_12(5Q1H)

[Raw transfer]




9M1_A_5(5Q0Z)
NR1H4_HUMAN
[Raw transfer]




9N1_A_5(5Q19)
NR1H4_HUMAN
[Raw transfer]




9N4_C_6(5Q1A)

[Raw transfer]




9KY_C_6(5Q0L)

[Raw transfer]




33Y_D_11(5Z12)
RXRA_HUMAN
[Raw transfer]




9NP_E_11(5Q1H)
NR1H4_HUMAN
[Raw transfer]




0X0_A_3(5Q0I)

[Raw transfer]




33Y_A_2(3FLI)

[Raw transfer]




33Y_A_9(5Z12)
NR1H4_HUMAN
[Raw transfer]




9LG_A_3(5Q0R)

[Raw transfer]




XX9_A_3(4OIV)
NR1H4_HUMAN
[Raw transfer]




XX9_B_4(4OIV)

[Raw transfer]




31D_A_5(4QE8)
NR1H4_HUMAN
[Raw transfer]




MUF_A_7(3BEJ)
NR1H4_HUMAN
[Raw transfer]




GWF_A_3(7D42)

[Raw transfer]




FEZ_A_5(5ICK)
NR1H4_HUMAN
[Raw transfer]




9MA_A_3(5Q12)

[Raw transfer]




635_A_2(3L1B)

[Raw transfer]




MUF_B_8(3BEJ)

[Raw transfer]




IU5_F_6(1OT7)

[Raw transfer]




XD4_A_3(5Y44)

[Raw transfer]




FEX_B_2(1OSH)

[Raw transfer]




T73_B_7(5IAW)

[Raw transfer]




FEZ_B_7(5ICK)

[Raw transfer]




9O1_A_3(5Q1I)

[Raw transfer]




CHC_G_7(1OT7)
NR1H4_RAT
[Raw transfer]




9NM_A_3(5Q1G)

[Raw transfer]




9L1_A_3(5Q0M)

[Raw transfer]




CHC_G_7(1OSV)
NR1H4_RAT
[Raw transfer]




AWL_C_6(6ITM)

[Raw transfer]




JN3_A_3(4QE6)

[Raw transfer]




9LD_C_6(5Q0Q)

[Raw transfer]




O62_A_3(3DCU)

[Raw transfer]




82X_A_3(3HC5)

[Raw transfer]




93U_B_6(5YXJ)

[Raw transfer]




7VX_B_9(5WZX)

[Raw transfer]




XD5_B_6(5Y49)

[Raw transfer]




CHC_F_6(1OSV)

[Raw transfer]




7VX_A_5(5WZX)
NR1H4_HUMAN
[Raw transfer]




59G_A_5(3RUT)

[Raw transfer]




9LD_A_5(5Q0Q)
NR1H4_HUMAN
[Raw transfer]




088_A_3(3HC6)

[Raw transfer]




XD5_A_5(5Y49)
NR1H4_HUMAN
[Raw transfer]




9LM_A_3(5Q0T)

[Raw transfer]




708_A_3(3GD2)

[Raw transfer]




064_A_3(3DCT)

[Raw transfer]




9R3_A_9(6A5Z)
NR1H4_HUMAN
[Raw transfer]




9M4_A_3(5Q10)

[Raw transfer]




P88_A_3(3P88)

[Raw transfer]




D5H_A_3(5Y1J)

[Raw transfer]




643_A_3(3FXV)

[Raw transfer]




37G_A_5(3RUU)

[Raw transfer]




31D_B_10(4QE8)

[Raw transfer]




643_A_3(5Q0X)

[Raw transfer]




JN3_A_3(6HL1)

[Raw transfer]




T73_A_6(5IAW)
NR1H4_HUMAN
[Raw transfer]




93R_A_3(5YXD)

[Raw transfer]




034_A_4(3RVF)

[Raw transfer]




NIW_C_6(5YXL)
NCOA2_HUMAN
[Raw transfer]




9R0_C_6(6A5W)

[Raw transfer]




9LV_A_3(5Q0W)

[Raw transfer]




IVM_A_9(4WVD)
NR1H4_HUMAN
[Raw transfer]




93O_A_3(5YXB)

[Raw transfer]




9R0_A_5(6A5W)
NR1H4_HUMAN
[Raw transfer]




9R3_A_7(6A5X)

[Raw transfer]




064_A_5(6A60)

[Raw transfer]




89P_A_3(3P89)

[Raw transfer]




AWL_A_5(6ITM)
NR1H4_HUMAN
[Raw transfer]




9R0_A_5(6A5Y)

[Raw transfer]




9NG_A_3(5Q1E)

[Raw transfer]




9M7_A_3(5Q11)

[Raw transfer]




9MV_A_3(5Q17)

[Raw transfer]




NIW_A_5(5YXL)
NR1H4_HUMAN
[Raw transfer]




IVM_B_14(4WVD)

[Raw transfer]




93U_A_5(5YXJ)
NR1H4_HUMAN
[Raw transfer]




100 Blastp_CBE 86.1499%-154 - C1 -3OMK 11.7
95 Blastp_CBE 84.8999%-147 - C1 -3OOK 12.1 NR1H4_HUMAN
96 Blastp_CBE 84.8299%-149 - C1 -3OOF 11.7
20 PsiBlast_PDB 84.80100%-154 - C1 -5IAW 6.5 NR1H4_HUMAN
9 PsiBlast_PDB 84.29100%-154 - C1 -5ICK 5.9 NR1H4_HUMAN
85 Blastp_CBE 83.5499%-151 - C1 -5Q0P 12.0 NR1H4_HUMAN
80 Blastp_CBE 83.4299%-148 - C1 -5Q0S 11.4 NR1H4_HUMAN
55 Blastp_CBE 83.2699%-148 - C1 -5Q18 11.2 NR1H4_HUMAN
49 Blastp_CBE 83.1699%-142 - C1 -5Q1B 12.1 NR1H4_HUMAN
63 Blastp_CBE 83.0199%-151 - C1 -5Q13 11.3
76 Blastp_CBE 82.9899%-150 - C1 -5Q0U 11.8
77 Blastp_CBE 82.7899%-147 - C1 -5Q0U 11.6 NR1H4_HUMAN
99 Blastp_CBE 82.7299%-147 - C1 -3OMM 11.6 NR1H4_HUMAN
60 Blastp_CBE 82.2699%-147 - C1 -5Q15 11.1 NR1H4_HUMAN
37 Blastp_CBE 82.0699%-148 - C1 -5Q1H 12.2 NR1H4_HUMAN
42 Blastp_CBE 82.0599%-151 - C1 -5Q1F 11.0 NR1H4_HUMAN
79 Blastp_CBE 81.6499%-150 - C1 -5Q0S 11.5
45 Blastp_CBE 81.6299%-148 - C1 -5Q1D 11.1 NR1H4_HUMAN
101 Blastp_CBE 81.3299%-146 - C1 -3OMK 11.7 NR1H4_HUMAN
92 Blastp_CBE 81.2699%-146 - C1 -5Q0J 11.7 NR1H4_HUMAN
62 Blastp_CBE 81.1799%-149 - C1 -5Q14 11.7 NR1H4_HUMAN
94 Blastp_CBE 81.1199%-146 - C1 -3OOK 12.1
102 Blastp_CBE 81.0499%-147 - C1 -3OLF 11.9
28 Blastp_CBE 80.93100%-156 - C1 -5IAW 5.5
36 Blastp_CBE 80.8899%-152 - C1 -5Q1H 12.3
51 Blastp_CBE 80.6699%-147 - C1 -5Q1A 11.8 NR1H4_HUMAN
103 Blastp_CBE 80.6299%-142 - C1 -3OLF 11.7 NR1H4_HUMAN
91 Blastp_CBE 80.5499%-143 - C1 -5Q0J 11.8
84 Blastp_CBE 80.4299%-143 - C1 -5Q0P 11.5
105 Blastp_CBE 80.0599%-142 - C1 -3OKI 10.8 NR1H4_HUMAN
75 Blastp_CBE 80.0299%-146 - C1 -5Q0V 11.3 NR1H4_HUMAN
64 Blastp_CBE 80.0199%-153 - C1 -5Q13 11.4 NR1H4_HUMAN
87 Blastp_CBE 79.9599%-141 - C1 -5Q0O 12.8 NR1H4_HUMAN
89 Blastp_CBE 79.7599%-146 - C1 -5Q0N 12.1 NR1H4_HUMAN
59 Blastp_CBE 79.3299%-146 * C1 *5Q15 11.1
93 Blastp_CBE 79.2199%-156 - C1 -5Q0I 9.5
74 Blastp_CBE 79.1999%-145 - C1 -5Q0V 11.5
57 Blastp_CBE 79.1799%-144 - C1 -5Q16 11.7
68 Blastp_CBE 79.0699%-146 - C1 -5Q0Z 10.1
70 Blastp_CBE 78.9299%-144 - C1 -5Q0Y 11.9
52 Blastp_CBE 78.8699%-147 - C1 -5Q19 11.2
53 Blastp_CBE 78.8599%-146 - C1 -5Q19 11.2 NR1H4_HUMAN
71 Blastp_CBE 78.8499%-142 - C1 -5Q0Y 12.0 NR1H4_HUMAN
98 Blastp_CBE 78.7599%-143 - C1 -3OMM 11.9
69 Blastp_CBE 78.6199%-146 - C1 -5Q0Z 9.7 NR1H4_HUMAN
27 Blastp_CBE 78.40100%-156 - C1 -5Z12 9.5 NR1H4_HUMAN (first)
97 Blastp_CBE 78.3799%-142 - C1 -3OOF 11.7 NR1H4_HUMAN
58 Blastp_CBE 78.3699%-141 - C1 -5Q16 11.9 NR1H4_HUMAN
44 Blastp_CBE 78.3599%-148 - C1 -5Q1D 11.1
104 Blastp_CBE 78.2999%-144 - C1 -3OKI 10.5
50 Blastp_CBE 78.2399%-146 - C1 -5Q1A 11.7
24 Blastp_CBE 78.17100%-151 - C1 -5ICK 5.3
47 Blastp_CBE 78.0399%-141 - C1 -5Q1C 11.0 NR1H4_HUMAN
48 Blastp_CBE 77.7899%-142 - C1 -5Q1B 11.9
39 Blastp_CBE 77.4199%-146 - C1 -5Q1H 12.0 NR1H4_HUMAN
31 Blastp_CBE 76.8899%-149 - C1 -6ITM 7.9
86 Blastp_CBE 76.6899%-145 - C1 -5Q0O 12.6
46 Blastp_CBE 76.5699%-144 - C1 -5Q1C 11.2
115 Blastp_CBE 75.9999%-146 - C1 -6A5Y 11.8
61 Blastp_CBE 75.8999%-140 - C1 -5Q14 11.1
88 Blastp_CBE 75.6399%-146 - C1 -5Q0N 12.0
54 Blastp_CBE 75.4699%-142 - C1 -5Q18 10.8
38 Blastp_CBE 74.9599%-142 - C1 -5Q1H 12.0 NR1H4_HUMAN
41 Blastp_CBE 74.9099%-143 - C1 -5Q1F 10.6
26 Blastp_CBE 74.89100%-157 - C1 -5Z12 9.1 RXRA_HUMAN
11 PsiBlast_PDB 74.69100%-141 - C1 -5YXD 7.4
4 PsiBlast_PDB 73.73100%-140 - C1 -3HC5 11.8
106 Blastp_CBE 73.3199%-150 - C1 -3OKH 10.5
8 PsiBlast_PDB 73.26100%-136 - C1 -3RUU 12.2
21 Blastp_CBE 72.78100%-139 - C1 -3BEJ 9.9
2 PsiBlast_PDB 72.43100%-136 - C1 -3DCT 11.3
3 PsiBlast_PDB 72.34100%-136 - C1 -3DCU 11.4
16 PsiBlast_PDB 72.12100%-141 - C1 -4QE6 9.3
117 Blastp_CBE 72.0799%-147 - C1 -6A5W 11.3 NR1H4_HUMAN
12 PsiBlast_PDB 71.89100%-137 - C1 -5YXJ 9.0 NR1H4_HUMAN
33 Blastp_CBE 71.02100%-143 - C1 -5Y49 5.4
10 PsiBlast_PDB 70.82100%-161 - C1 -5YXB 5.3
7 PsiBlast_PDB 70.73100%-127 - C1 -3RUT 11.6
116 Blastp_CBE 70.3299%-141 - C1 -6A5W 11.1
34 Blastp_CBE 69.77100%-144 - C1 -5Y49 4.4 NR1H4_HUMAN
65 Blastp_CBE 69.5999%-144 - C1 -5Q12 8.9
5 PsiBlast_PDB 68.97100%-135 - C1 -3RVF 10.8
40 Blastp_CBE 68.6699%-163 - C1 -5Q1G 9.5
109 Blastp_CBE 68.61100%-144 - C1 -7D42 10.0
1 PsiBlast_PDB 68.27100%-144 - C1 -3BEJ 10.0 NR1H4_HUMAN
32 Blastp_CBE 68.1399%-149 - C1 -6ITM 8.4 NR1H4_HUMAN
123 Blastp_CBE 66.5398%-146 - C1 -5Y44 7.0
73 Blastp_CBE 66.3599%-140 - C1 -5Q0W 11.0
67 Blastp_CBE 66.1899%-142 - C1 -5Q10 10.6
15 PsiBlast_PDB 65.71100%-144 - C1 -6HL1 9.5
78 Blastp_CBE 64.6099%-153 - C1 -5Q0T 8.9
72 Blastp_CBE 64.1299%-163 - C1 -5Q0X 12.3
111 Blastp_CBE 63.9299%-146 - C1 -6A5Z 9.2
43 Blastp_CBE 63.5699%-148 - C1 -5Q1E 10.2
82 Blastp_CBE 63.4099%-149 - C1 -5Q0Q 10.7
118 Blastp_CBE 63.3699%-131 - C1 -3P88 11.1
108 Blastp_CBE 61.7199%-125 - C1 -3HC6 11.7
6 PsiBlast_PDB 61.4799%-155 - C1 -3FLI 9.6
35 Blastp_CBE 61.3399%-136 - C1 -5Q1I 10.3
113 Blastp_CBE 61.1499%-130 - C1 -6A5X 11.7
131 Blastp_CBE 60.4695%-149 - C1 -5Q0L 8.6 NR1H4_HUMAN
120 Blastp_CBE 60.3598%-141 - C1 -5Y1J 9.1
130 Blastp_CBE 59.7895%-145 - C1 -5Q0L 7.7
13 PsiBlast_PDB 59.06100%-141 - C1 -5YXL 6.9 NR1H4_HUMAN
66 Blastp_CBE 58.8699%-154 - C1 -5Q11 9.5
90 Blastp_CBE 58.0599%-139 - C1 -5Q0M 10.6
124 Blastp_CBE 57.5194%-140 - C1 -1OSV 9.9
56 Blastp_CBE 57.2499%-143 - C1 -5Q17 9.5
119 Blastp_CBE 56.7299%-132 - C1 -3GD2 12.1
81 Blastp_CBE 56.6799%-143 - C1 -5Q0R 10.7
83 Blastp_CBE 56.5599%-148 - C1 -5Q0Q 10.5 NR1H4_HUMAN
125 Blastp_CBE 56.1894%-143 - C1 -1OSV 9.3 NR1H4_RAT
17 PsiBlast_PDB 55.91100%-140 - C1 -4QE8 5.5 NR1H4_HUMAN
112 Blastp_CBE 55.9099%-148 - C1 -6A5Z 10.2 NR1H4_HUMAN (first)
107 Blastp_CBE 55.1599%-158 - C1 -3FXV 11.5
126 Blastp_CBE 52.6495%-137 - C1 -1OT7 8.6
25 Blastp_CBE 52.46100%-137 - C1 -4QE8 4.9
23 Blastp_CBE 50.86100%-137 - C1 -5YXJ 9.7
127 Blastp_CBE 50.6295%-130 - C1 -1OT7 8.8 NR1H4_RAT
114 Blastp_CBE 47.7499%-134 - C1 -3P89 12.2
19 PsiBlast_PDB 44.22100%-150 - C1 -3L1B 10.6
18 PsiBlast_PDB 43.30100%-158 - C1 -1OSH 11.1
22 Blastp_CBE 40.31100%-155 - C1 -5YXL 7.3 NCOA2_HUMAN
110 Blastp_CBE 38.3899%-142 - C1 -6A60 10.6
121 Blastp_CBE 37.5099%-138 - C1 -4OIV 9.2
30 Blastp_CBE 36.70100%-152 - C1 -5WZX 8.4 NR1H4_HUMAN
29 Blastp_CBE 31.63100%-142 - C1 -5WZX 7.5
122 Blastp_CBE 26.3099%-153 - C1 -4OIV 8.8 NR1H4_HUMAN
128 Blastp_CBE 9.04100%-130 - C1 -4WVD 5.4
129 Blastp_CBE 6.63100%-128 - C1 -4WVD 8.8 NR1H4_HUMAN