@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B1_RXRa: (2021-05-27 )
MDTKHFLPLDFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

Atome Classification :

(121 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]



K08_D_6(4N8R)
?
[Raw transfer]



K08_A_5(4N8R)
?
[Raw transfer]



K09_A_5(4N5G)
?
[Raw transfer]



3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]



3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]



2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]



9RA_A_3(4K6I)
?
[Raw transfer]



754_A_3(6STI)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]



3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]



HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]



2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]



BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]



2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]



REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]



7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]



4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]



E80_A_5(6LB5)
RXRA_HUMAN
[Raw transfer]



BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]



R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]



BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]



3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]



5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]



4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]



BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]



21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]



BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]



L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]



PLM_A_4(7A77)
?
[Raw transfer]



29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]



REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]



E8L_A_3(6LB4)
RXRA_HUMAN
[Raw transfer]



3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]



REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]



I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]



PLM_A_5(7A79)
RXRG_HUMAN
[Raw transfer]



1O8_A_3(4K4J)
?
[Raw transfer]



PLM_A_3(7A78)

[Raw transfer]



E8O_A_3(6LB6)
RXRA_HUMAN
[Raw transfer]



REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]



E80_C_6(6LB5)

[Raw transfer]



P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]



REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]



REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]



4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]



I5W_C_7(5MK4)
?
[Raw transfer]



5LO_A_3(5EC9)
?
[Raw transfer]



21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]



9RA_A_5(3H0A)

[Raw transfer]



2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]



9CR_L_12(6A5Z)
?
[Raw transfer]



REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]



754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]



REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]



REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]



PLM_B_6(7A79)

[Raw transfer]



OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]



9CR_D_10(6A5Z)
RXRA_HUMAN
[Raw transfer]



REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]



9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]



WY5_B_6(6JNR)
?
[Raw transfer]



9CR_B_12(5Z12)
NCOA2_HUMAN
[Raw transfer]



9HF_A_3(6L6K)
RXRA_HUMAN
[Raw transfer]



SJZ_A_3(5MMW)

[Raw transfer]



2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]



9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]



9CR_D_7(6A5Y)
?
[Raw transfer]



REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]



WY5_A_5(6JNR)
RXRA_HUMAN
[Raw transfer]



F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]



9CR_D_6(6A60)
RXRA_HUMAN
[Raw transfer]



J57_A_3(5MKU)
RXRA_HUMAN
[Raw transfer]



9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]



F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]



LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]



2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]



LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]



LG2_D_13(1H9U)

[Raw transfer]



LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]



MEI_F_6(1UHL)

[Raw transfer]



7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]



F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]



T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]



REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]



TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]



REA_C_7(3FAL)
RXRA_HUMAN
[Raw transfer]



F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]



REA_A_5(3FAL)
RXRA_HUMAN
[Raw transfer]



MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]



MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]



LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]



BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]



T2K_A_3(7B88)
?
[Raw transfer]



T72_A_3(7B9O)
?
[Raw transfer]



LFZ_A_3(6SJM)
RXRA_HUMAN
[Raw transfer]



BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]



REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]



REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]



9HF_C_15(5ZQU)
?
[Raw transfer]



K08_D_6(4N8R)
?
[Raw transfer]



K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]



K09_D_6(4N5G)
?
[Raw transfer]



K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]



RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]



RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]



NEQ_U_4(4OZT)
?
[Raw transfer]



WZ6_B_6(7CFO)
?
[Raw transfer]



9HF_D_19(5ZQU)
?
[Raw transfer]



9HF_D_19(5ZQU)
?
[Raw transfer]



9HF_A_6(5ZQU)
RXRA_HUMAN
[Raw transfer]



WZ6_C_8(7CFO)
?
[Raw transfer]



WY5_A_5(6JNO)
RXRA_HUMAN
[Raw transfer]



WZ6_C_8(7CFO)
RXRA_HUMAN
[Raw transfer]



WZ6_B_6(7CFO)
?
[Raw transfer]



WY5_A_5(6JNO)
?
[Raw transfer]
21 Blastp_CBE 81.57100%-112 - C1 -4NQA - ? -
4 PsiBlast_PDB 79.62100%-139 - C1 -5UAN 7.2 RXRA_HUMAN
3 PsiBlast_PDB 77.89100%-104 - C1 -4NQA - RXRA_HUMAN -
1 PsiBlast_PDB 77.72100%-127 - C1 -3DZU 7.2 RXRA_HUMAN
2 PsiBlast_PDB 77.02100%-126 - C1 -3E00 7.7 RXRA_HUMAN
17 PsiBlast_PDB 66.39100%-145 - C1 -2P1U 10.1 RXRA_HUMAN
78 Blastp_CBE 65.96100%-142 - C1 -3OZJ 2.7 RXRA_HUMAN
118 Blastp_CBE 65.51100%-141 - C1 -5MKJ 8.6 RXRA_HUMAN
24 Blastp_CBE 65.42100%-143 - C1 -3R5M 6.6 RXRA_HUMAN
52 Blastp_CBE 65.4099%-137 - C1 -6LB5 8.4
134 Blastp_CBE 65.2588%-147 - C1 -5HJP - -
119 Blastp_CBE 65.19100%-142 * C1 *3PCU 4.7 RXRA_HUMAN
20 PsiBlast_PDB 65.16100%-140 - C1 -2ZXZ 9.3 RXRA_HUMAN
38 Blastp_CBE 65.09100%-130 - C1 -7A77 7.7 ?
127 Blastp_CBE 65.00100%-142 - C1 -5MKU 8.3 RXRA_HUMAN
53 Blastp_CBE 64.9899%-142 - C1 -6LB5 8.9 RXRA_HUMAN
75 Blastp_CBE 64.96100%-140 - C1 -6A5Z 9.0 ?
16 PsiBlast_PDB 64.93100%-140 - C1 -2P1T 9.7 RXRA_HUMAN
8 PsiBlast_PDB 64.71100%-141 - C1 -3KWY 7.5 RXRA_HUMAN
36 Blastp_CBE 64.67100%-130 - C1 -1MZN 9.9 RXRA_HUMAN
54 Blastp_CBE 64.5099%-134 - C1 -6LB4 8.8 RXRA_HUMAN
133 Blastp_CBE 64.4387%-144 - C1 -1UHL 5.8
116 Blastp_CBE 64.32100%-134 - C1 -4K4J 8.3 ?
55 Blastp_CBE 64.3199%-140 - C1 -6L6K 9.6 RXRA_HUMAN
123 Blastp_CBE 64.10100%-138 - C1 -5MJ5 9.6 RXRA_HUMAN
15 PsiBlast_PDB 64.08100%-129 - C1 -1MZN 9.8 RXRA_HUMAN
114 Blastp_CBE 64.06100%-135 - C1 -4M8E 8.4 RXRA_HUMAN
104 Blastp_CBE 64.0299%-138 - C1 -1DKF 7.4 RXRA_MOUSE
12 PsiBlast_PDB 64.00100%-137 - C1 -6STI 10.5 RXRA_HUMAN
19 PsiBlast_PDB 63.98100%-138 - C1 -3FUG 9.7 RXRA_HUMAN
74 Blastp_CBE 63.93100%-136 - C1 -6A60 7.7 RXRA_HUMAN
18 PsiBlast_PDB 63.91100%-136 - C1 -2P1V 10.3 RXRA_HUMAN
111 Blastp_CBE 63.87100%-134 - C1 -4POJ 8.9 RXRA_HUMAN
57 Blastp_CBE 63.8399%-133 - C1 -6JNR 9.8 RXRA_HUMAN
73 Blastp_CBE 63.82100%-136 - C1 -1RDT 9.8 RXRA_HUMAN
7 PsiBlast_PDB 63.81100%-138 - C1 -3E94 5.8 RXRA_HUMAN
56 Blastp_CBE 63.6499%-132 - C1 -6JNR 10.0 ?
108 Blastp_CBE 63.52100%-135 - C1 -4RFW 8.1 RXRA_HUMAN
6 PsiBlast_PDB 63.51100%-134 - C1 -4OC7 7.5 RXRA_HUMAN
14 PsiBlast_PDB 63.50100%-133 - C1 -1MVC 10.2 RXRA_HUMAN
112 Blastp_CBE 63.43100%-135 - C1 -4POH 8.2 RXRA_HUMAN
13 PsiBlast_PDB 63.31100%-130 - C1 -1MV9 8.8 RXRA_HUMAN
129 Blastp_CBE 63.1887%-136 - C1 -7A79 6.7
79 Blastp_CBE 63.14100%-132 - C1 -3OZJ 4.1 RXRA_HUMAN
33 Blastp_CBE 63.14100%-130 - C1 -2ZY0 9.2 RXRA_HUMAN
95 Blastp_CBE 63.1399%-131 - C1 -1XDK 7.7 RXRA_MOUSE
131 Blastp_CBE 63.1192%-140 - C1 -5EC9 10.2 ?
98 Blastp_CBE 63.08100%-130 - C1 -4RME 9.4 RXRA_HUMAN
22 Blastp_CBE 63.08100%-133 - C1 -5LYQ 10.6 RXRA_HUMAN
110 Blastp_CBE 63.04100%-130 - C1 -4PP3 8.8 RXRA_HUMAN
51 Blastp_CBE 63.0399%-136 - C1 -6LB6 8.4 RXRA_HUMAN
77 Blastp_CBE 62.97100%-136 - C1 -6A5Y 8.7 ?
94 Blastp_CBE 62.9599%-132 - C1 -1XDK 7.6 RXRA_MOUSE
23 Blastp_CBE 62.92100%-130 - C1 -4ZSH 8.1 RXRA_HUMAN
117 Blastp_CBE 62.88100%-129 - C1 -3OAP 7.7 RXRA_HUMAN
43 Blastp_CBE 62.84100%-161 - C1 -4N8R Error ?
37 Blastp_CBE 62.81100%-133 - C1 -1MZN 9.8 RXRA_HUMAN
25 Blastp_CBE 62.76100%-131 - C1 -3R5M 7.2 RXRA_HUMAN
34 Blastp_CBE 62.75100%-129 - C1 -2ZY0 9.1 RXRA_HUMAN
120 Blastp_CBE 62.67100%-136 - C1 -5MMW 8.1
115 Blastp_CBE 62.64100%-131 - C1 -4K6I 9.4 ?
99 Blastp_CBE 62.59100%-129 - C1 -4RMD 9.9 RXRA_HUMAN
90 Blastp_CBE 62.57100%-116 - C1 -1XVP 5.8 RXRA_HUMAN
76 Blastp_CBE 62.55100%-128 - C1 -6A5Z 8.6 RXRA_HUMAN
124 Blastp_CBE 62.41100%-136 - C1 -7B9O 9.9 ?
113 Blastp_CBE 62.31100%-132 - C1 -4M8H 8.2 RXRA_HUMAN
109 Blastp_CBE 62.23100%-129 - C1 -4PP5 8.9 RXRA_HUMAN
125 Blastp_CBE 62.15100%-131 - C1 -7B88 8.2 ?
35 Blastp_CBE 62.14100%-129 - C1 -1MZN 9.8 RXRA_HUMAN
126 Blastp_CBE 62.11100%-131 - C1 -6SJM 7.8 RXRA_HUMAN
122 Blastp_CBE 62.03100%-131 - C1 -5MK4 9.2 RXRA_HUMAN
130 Blastp_CBE 61.8887%-137 - C1 -7A79 7.2 RXRG_HUMAN
68 Blastp_CBE 61.60100%-130 - C1 -3UVV 7.9 RXRA_HUMAN
42 Blastp_CBE 61.54100%-160 - C1 -4N8R 8.0 ?
140 Blastp_CBE 61.4988%-157 - C1 -1H9U 9.8 RXRB_HUMAN
107 Blastp_CBE 61.48100%-126 - C1 -4RMC 8.2 RXRA_HUMAN
132 Blastp_CBE 61.3587%-134 - C1 -7A78 7.6
87 Blastp_CBE 61.19100%-113 - C1 -1FM9 8.7 RXRA_HUMAN
46 Blastp_CBE 61.14100%-144 - C1 -4N5G Error ?
89 Blastp_CBE 61.11100%-118 - C1 -1FM6 8.1 RXRA_HUMAN
121 Blastp_CBE 60.85100%-129 - C1 -5MK4 9.3 ?
44 Blastp_CBE 60.72100%-156 - C1 -4N8R Error ?
105 Blastp_CBE 60.71100%-137 - C1 -5Z12 8.0 RXRA_HUMAN
84 Blastp_CBE 60.63100%-111 - C1 -1K74 7.8 RXRA_HUMAN
88 Blastp_CBE 60.48100%-116 - C1 -1FM6 8.5 RXRA_HUMAN
138 Blastp_CBE 60.4388%-154 - C1 -1H9U 9.5 RXRB_HUMAN
63 Blastp_CBE 60.1699%-157 - C1 -5ZQU 3.9 RXRA_HUMAN
9 PsiBlast_PDB 60.08100%-160 - C1 -4N5G 8.4 RXRA_HUMAN
139 Blastp_CBE 60.0288%-153 - C1 -1H9U 9.9 RXRB_HUMAN
85 Blastp_CBE 59.95100%-130 - C1 -1G5Y 6.3 RXRA_HUMAN
59 Blastp_CBE 59.9099%-164 - C1 -6JNO 3.2 RXRA_HUMAN
137 Blastp_CBE 59.7488%-152 - C1 -1H9U 9.6
106 Blastp_CBE 59.71100%-125 - C1 -5Z12 7.4 NCOA2_HUMAN (first)
60 Blastp_CBE 59.5999%-156 - C1 -5ZQU 4.1 ?
45 Blastp_CBE 59.57100%-155 - C1 -4N5G 8.1 ?
92 Blastp_CBE 59.45100%-112 - C1 -1XV9 5.4 RXRA_HUMAN
49 Blastp_CBE 58.9899%-147 - C1 -7CFO 5.7 ?
48 Blastp_CBE 58.8799%-144 - C1 -7CFO 7.1 ?
66 Blastp_CBE 58.4299%-121 - C1 -5JI0 7.0 RXRA_HUMAN
61 Blastp_CBE 58.2399%-152 - C1 -5ZQU 7.8 ?
93 Blastp_CBE 58.02100%-108 - C1 -1XV9 6.0 RXRA_HUMAN
64 Blastp_CBE 57.89100%-122 - C1 -1FBY 8.1 RXRA_HUMAN
65 Blastp_CBE 57.71100%-119 - C1 -1FBY 8.0 RXRA_HUMAN
58 Blastp_CBE 57.2599%-146 - C1 -6JNO 4.1 ?
50 Blastp_CBE 57.0799%-162 - C1 -7CFO 3.9 RXRA_HUMAN
10 PsiBlast_PDB 57.07100%-150 - C1 -4N8R 8.2 RXRA_HUMAN
62 Blastp_CBE 57.0199%-147 - C1 -5ZQU 3.5 ?
70 Blastp_CBE 56.90100%-134 - C1 -3FC6 Error RXRA_HUMAN
91 Blastp_CBE 56.81100%-105 - C1 -1XVP 5.4 RXRA_HUMAN
47 Blastp_CBE 56.7199%-168 - C1 -7CFO 3.7 ?
86 Blastp_CBE 55.45100%-120 - C1 -1G5Y 6.6 RXRA_HUMAN
142 Blastp_CBE 54.4175%-155 - C1 -4OZT 2.9 ?
71 Blastp_CBE 54.27100%-129 - C1 -3FAL 7.3 RXRA_HUMAN
67 Blastp_CBE 54.0599%-113 - C1 -3A9E 9.2 RXRA_MOUSE
136 Blastp_CBE 53.9482%-127 - C1 -1XIU 8.2 RXR_BIOGL
27 Blastp_CBE 53.46100%-128 - C1 -3R2A 3.8 RXRA_HUMAN
69 Blastp_CBE 52.91100%-122 - C1 -3FC6 7.9 RXRA_HUMAN
135 Blastp_CBE 52.7182%-117 - C1 -1XIU 8.3 RXR_BIOGL
29 Blastp_CBE 52.56100%-116 - C1 -3R2A 3.7 RXRA_HUMAN
72 Blastp_CBE 51.64100%-125 - C1 -3FAL 6.8 RXRA_HUMAN
128 Blastp_CBE 51.40100%-113 - C1 -3H0A 8.2