@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B2_RXRb: (2021-05-27 )
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA

Atome Classification :

(108 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K09_A_5(4N5G)
?
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




754_A_3(6STI)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




PLM_A_5(7A79)
RXRG_HUMAN
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




PLM_A_4(7A77)
?
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




PLM_B_6(7A79)

[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




E8L_A_3(6LB4)
RXRA_HUMAN
[Raw transfer]




E80_A_5(6LB5)
RXRA_HUMAN
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




E8O_A_3(6LB6)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




E80_C_6(6LB5)

[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




9CR_B_12(5Z12)
NCOA2_HUMAN
[Raw transfer]




WY5_A_5(6JNR)
RXRA_HUMAN
[Raw transfer]




9HF_A_3(6L6K)
RXRA_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




9CR_D_6(6A60)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




WY5_B_6(6JNR)
?
[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




J57_A_3(5MKU)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




T2K_A_3(7B88)
?
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




T72_A_3(7B9O)
?
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




LFZ_A_3(6SJM)
RXRA_HUMAN
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




WZ6_B_6(7CFO)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




WZ6_C_8(7CFO)
?
[Raw transfer]




WY5_A_5(6JNO)
RXRA_HUMAN
[Raw transfer]




WZ6_C_8(7CFO)
RXRA_HUMAN
[Raw transfer]




WZ6_B_6(7CFO)
?
[Raw transfer]




WY5_A_5(6JNO)
?
[Raw transfer]




21 Blastp_CBE 83.4183% 1 - C1 -4NQA - ? -
4 PsiBlast_PDB 83.3683%-139 - C1 -5UAN - RXRA_HUMAN -
1 PsiBlast_PDB 80.3773%-126 - C1 -3DZU - RXRA_HUMAN -
2 PsiBlast_PDB 80.1673%-126 - C1 -3E00 - RXRA_HUMAN -
3 PsiBlast_PDB 78.5083% 37 - C1 -4NQA - RXRA_HUMAN -
5 PsiBlast_PDB 77.14100%-146 - C1 -1UHL - -
22 Blastp_CBE 76.21100%-138 - C1 -7A78 - -
44 Blastp_CBE 75.3387%-128 - C1 -7A77 7.7 ?
122 Blastp_CBE 74.7089%-137 - C1 -4K4J 8.3 ?
87 Blastp_CBE 74.5888%-145 - C1 -3OZJ 2.7 RXRA_HUMAN
116 Blastp_CBE 74.2589%-134 - C1 -4PP3 8.8 RXRA_HUMAN
104 Blastp_CBE 74.1988%-133 - C1 -4RME 9.4 RXRA_HUMAN
126 Blastp_CBE 74.1589%-125 - C1 -1XLS - RXRA_HUMAN -
39 Blastp_CBE 74.1286%-137 - C1 -6JNR 9.8 RXRA_HUMAN
120 Blastp_CBE 74.0789%-139 - C1 -4M8E 8.4 RXRA_HUMAN
114 Blastp_CBE 74.0689%-139 - C1 -4RFW 8.1 RXRA_HUMAN
69 Blastp_CBE 74.0487%-134 - C1 -2ZY0 9.2 RXRA_HUMAN
107 Blastp_CBE 73.9888%-133 - C1 -1XDK 7.7 RXRA_MOUSE
117 Blastp_CBE 73.9589%-137 - C1 -4POJ 8.9 RXRA_HUMAN
59 Blastp_CBE 73.9587%-144 - C1 -3R5M 6.6 RXRA_HUMAN
38 Blastp_CBE 73.8286%-135 - C1 -6JNR 10.0 ?
106 Blastp_CBE 73.8088%-134 - C1 -1XDK 7.6 RXRA_MOUSE
118 Blastp_CBE 73.6889%-138 - C1 -4POH 8.2 RXRA_HUMAN
58 Blastp_CBE 73.6887%-133 - C1 -4ZSH 8.1 RXRA_HUMAN
105 Blastp_CBE 73.6688%-132 - C1 -4RMD 9.9 RXRA_HUMAN
133 Blastp_CBE 73.6389%-141 - C1 -5MJ5 9.6 RXRA_HUMAN
113 Blastp_CBE 73.6389%-130 - C1 -4RMC 8.2 RXRA_HUMAN
140 Blastp_CBE 73.5983%-138 - C1 -7A79 6.7
115 Blastp_CBE 73.5489%-133 - C1 -4PP5 8.9 RXRA_HUMAN
123 Blastp_CBE 73.5189%-132 - C1 -3OAP 7.7 RXRA_HUMAN
88 Blastp_CBE 73.4988%-134 - C1 -3OZJ 4.1 RXRA_HUMAN
71 Blastp_CBE 73.4087%-143 - C1 -2ZXZ 9.3 RXRA_HUMAN
100 Blastp_CBE 73.3888%-114 - C1 -1XVP 5.8 RXRA_HUMAN
132 Blastp_CBE 73.3289%-134 - C1 -5MK4 9.2 RXRA_HUMAN
141 Blastp_CBE 73.2683%-139 - C1 -7A79 7.2 RXRG_HUMAN
134 Blastp_CBE 73.2487%-138 - C1 -1DKF 7.3 RXRA_MOUSE
121 Blastp_CBE 73.2389%-134 - C1 -4K6I 9.4 ?
70 Blastp_CBE 73.1987%-132 - C1 -2ZY0 9.1 RXRA_HUMAN
60 Blastp_CBE 73.1187%-133 - C1 -3R5M 7.2 RXRA_HUMAN
130 Blastp_CBE 72.8689%-138 - C1 -5MMW 8.1
119 Blastp_CBE 72.7989%-135 - C1 -4M8H 8.2 RXRA_HUMAN
96 Blastp_CBE 72.5988%-114 - C1 -1FM9 8.7 RXRA_HUMAN
93 Blastp_CBE 72.3588%-112 - C1 -1K74 7.8 RXRA_HUMAN
102 Blastp_CBE 72.2988%-112 - C1 -1XV9 5.4 RXRA_HUMAN
103 Blastp_CBE 71.6788%-108 - C1 -1XV9 6.0 RXRA_HUMAN
98 Blastp_CBE 71.4188%-118 - C1 -1FM6 8.1 RXRA_HUMAN
78 Blastp_CBE 71.3087%-129 - C1 -1MZN 9.8 RXRA_HUMAN
34 Blastp_CBE 70.9886%-136 - C1 -6LB5 8.4
101 Blastp_CBE 70.9588%-106 - C1 -1XVP 5.4 RXRA_HUMAN
76 Blastp_CBE 70.6587%-129 - C1 -1MZN 9.9 RXRA_HUMAN
97 Blastp_CBE 70.0788%-115 - C1 -1FM6 8.5 RXRA_HUMAN
36 Blastp_CBE 69.9486%-133 - C1 -6LB4 8.8 RXRA_HUMAN
79 Blastp_CBE 69.6187%-136 - C1 -1MVC 10.2 RXRA_HUMAN
45 Blastp_CBE 69.3687%-140 - C1 -6STI 10.5 RXRA_HUMAN
112 Blastp_CBE 69.3189%-127 - C1 -5Z12 7.4 NCOA2_HUMAN (first)
137 Blastp_CBE 69.2589%-134 - C1 -6SJM 7.8 RXRA_HUMAN
128 Blastp_CBE 69.2089%-144 - C1 -5MKJ 8.6 RXRA_HUMAN
129 Blastp_CBE 69.1389%-144 - C1 -3PCU 4.7 RXRA_HUMAN
80 Blastp_CBE 69.1287%-133 - C1 -1MV9 8.8 RXRA_HUMAN
138 Blastp_CBE 69.0089%-146 - C1 -5MKU 8.3 RXRA_HUMAN
136 Blastp_CBE 69.0089%-134 - C1 -7B88 8.2 ?
72 Blastp_CBE 68.8787%-140 - C1 -2P1V 10.3 RXRA_HUMAN
57 Blastp_CBE 68.7687%-136 - C1 -5LYQ 10.6 RXRA_HUMAN
73 Blastp_CBE 68.7487%-148 - C1 -2P1U 10.1 RXRA_HUMAN
77 Blastp_CBE 68.6787%-135 - C1 -1MZN 9.8 RXRA_HUMAN
74 Blastp_CBE 68.5887%-144 - C1 -2P1T 9.7 RXRA_HUMAN
83 Blastp_CBE 68.5488%-139 - C1 -6A60 7.7 RXRA_HUMAN
85 Blastp_CBE 68.4588%-131 - C1 -6A5Z 8.6 RXRA_HUMAN
84 Blastp_CBE 68.4588%-144 - C1 -6A5Z 9.0 ?
131 Blastp_CBE 68.4389%-130 - C1 -5MK4 9.3 ?
75 Blastp_CBE 68.4287%-132 - C1 -1MZN 9.8 RXRA_HUMAN
37 Blastp_CBE 68.3786%-143 - C1 -6L6K 9.6 RXRA_HUMAN
94 Blastp_CBE 68.2988%-129 - C1 -1G5Y 6.3 RXRA_HUMAN
68 Blastp_CBE 68.2787%-140 - C1 -3FUG 9.7 RXRA_HUMAN
35 Blastp_CBE 68.2586%-144 - C1 -6LB5 8.9 RXRA_HUMAN
33 Blastp_CBE 68.2086%-139 - C1 -6LB6 8.4 RXRA_HUMAN
142 Blastp_CBE 68.0585%-143 - C1 -5EC9 10.2 ?
135 Blastp_CBE 67.6489%-138 * C1 *7B9O 9.9 ?
108 Blastp_CBE 67.2886%-124 - C1 -5JI0 7.0 RXRA_HUMAN
86 Blastp_CBE 66.9688%-139 - C1 -6A5Y 8.7 ?
95 Blastp_CBE 66.6988%-119 - C1 -1G5Y 6.6 RXRA_HUMAN
82 Blastp_CBE 66.2087%-120 - C1 -1FBY 8.0 RXRA_HUMAN
111 Blastp_CBE 65.7589%-141 - C1 -5Z12 8.0 RXRA_HUMAN
81 Blastp_CBE 65.6887%-124 - C1 -1FBY 8.1 RXRA_HUMAN
143 Blastp_CBE 65.2378%-115 - C1 -1XIU 8.3 RXR_BIOGL
52 Blastp_CBE 65.2287%-159 - C1 -4N8R Error ?
55 Blastp_CBE 65.1287%-147 - C1 -4N5G Error ?
40 Blastp_CBE 64.0586%-148 - C1 -6JNO 4.1 ?
139 Blastp_CBE 63.7289%-114 - C1 -3H0A 8.2
30 Blastp_CBE 63.6486%-147 - C1 -7CFO 7.1 ?
42 Blastp_CBE 63.2086%-155 - C1 -5ZQU 7.8 ?
43 Blastp_CBE 63.1586%-150 - C1 -5ZQU 3.5 ?
51 Blastp_CBE 63.0187%-163 - C1 -4N8R Error ?
31 Blastp_CBE 62.6886%-148 - C1 -7CFO 5.7 ?
99 Blastp_CBE 62.5887%-116 - C1 -3A9E 9.2 RXRA_MOUSE
144 Blastp_CBE 62.2378%-125 - C1 -1XIU 8.2 RXR_BIOGL
14 PsiBlast_PDB 61.8187%-136 - C1 -3FC6 Error RXRA_HUMAN
50 Blastp_CBE 61.4787%-162 - C1 -4N8R 8.0 ?
64 Blastp_CBE 61.1787%-119 - C1 -3R2A 3.7 RXRA_HUMAN
56 Blastp_CBE 60.8587%-164 - C1 -4N5G 8.4 RXRA_HUMAN
17 PsiBlast_PDB 60.7386%-167 - C1 -6JNO 3.2 RXRA_HUMAN
53 Blastp_CBE 60.4087%-153 - C1 -4N8R 8.2 RXRA_HUMAN
54 Blastp_CBE 59.8387%-158 - C1 -4N5G 8.2 ?
32 Blastp_CBE 59.5586%-164 - C1 -7CFO 3.9 RXRA_HUMAN
41 Blastp_CBE 59.1686%-159 - C1 -5ZQU 4.1 ?
146 Blastp_CBE 59.0776%-157 - C1 -4OZT 2.9 ?
29 Blastp_CBE 58.4186%-171 - C1 -7CFO 3.7 ?
62 Blastp_CBE 58.3787%-130 - C1 -3R2A 3.8 RXRA_HUMAN