@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B1_ERRa: (2021-05-27 )
MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1OH_A_2(2ZAS)
ERR3_HUMAN
[Raw transfer]




OHT_A_2(2P7Z)
ERR3_HUMAN
[Raw transfer]




047_B_4(2PJL)
ERR1_HUMAN
[Raw transfer]




TXF_D_9(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_C_8(2EWP)
ERR3_HUMAN
[Raw transfer]




OHT_D_4(1VJB)
ERR3_HUMAN
[Raw transfer]




OHT_A_2(2GPU)

[Raw transfer]




047_A_3(2PJL)
ERR1_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




2OH_A_3(2P7G)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




BPZ_A_2(2ZKC)
ERR3_HUMAN
[Raw transfer]




TXF_B_7(2EWP)
ERR3_HUMAN
[Raw transfer]




90C_B_5(5YSO)
ERR3_HUMAN
[Raw transfer]




H3W_A_2(6I61)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(6I63)
ERR3_HUMAN
[Raw transfer]




TXF_E_10(2EWP)

[Raw transfer]




90C_A_4(5YSO)
ERR3_HUMAN
[Raw transfer]




OHT_C_3(1VJB)
ERR3_HUMAN
[Raw transfer]




H4Q_A_2(6I66)
ERR3_HUMAN
[Raw transfer]




H48_A_2(6I64)
ERR3_HUMAN
[Raw transfer]




9S6_A_4(6A6K)
ERR3_HUMAN
[Raw transfer]




DES_H_8(1S9P)

[Raw transfer]




90C_C_6(5YSO)

[Raw transfer]




H3Z_A_2(6I65)
ERR3_HUMAN
[Raw transfer]




CW6_A_2(6K3N)

[Raw transfer]




2OH_B_6(6LIT)
ERR2_HUMAN
[Raw transfer]




9S6_B_5(6A6K)
ERR3_HUMAN
[Raw transfer]




9S6_C_6(6A6K)

[Raw transfer]




43M_A_2(2P7A)
ERR3_HUMAN
[Raw transfer]




GOL_A_3(6I66)
ERR3_HUMAN
[Raw transfer]




2OH_A_5(6LIT)
ERR2_HUMAN
[Raw transfer]




GOL_A_3(6I64)
ERR3_HUMAN
[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




27N_A_2(6I62)
ERR3_HUMAN
[Raw transfer]




DES_F_6(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_G_7(1S9P)
ERR3_MOUSE
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




CHD_E_5(1S9Q)
ERR3_MOUSE
[Raw transfer]




CHD_F_6(1S9Q)
ERR3_MOUSE
[Raw transfer]




1 PsiBlast_PDB 70.78100%-152 - C1 -3K6P 6.9 ERR1_HUMAN
2 PsiBlast_PDB 64.90100%-167 - C1 -1XB7 - ERR1_HUMAN -
4 PsiBlast_PDB 62.8095%-165 - C1 -3D24 - ERR1_HUMAN -
52 Blastp_CBE 57.8563%-139 - C1 -2ZAS 6.9 ERR3_HUMAN
46 Blastp_CBE 57.2863%-137 - C1 -2P7A 4.2 ERR3_HUMAN
26 Blastp_CBE 55.1463%-137 - C1 -2EWP 9.0 ERR3_HUMAN
19 PsiBlast_PDB 55.1059%-137 * C1 *6I65 4.5 ERR3_HUMAN
8 PsiBlast_PDB 54.7462%-139 - C1 -2GP7 - ERR3_HUMAN -
25 Blastp_CBE 54.0863%-133 - C1 -2EWP 8.8 ERR3_HUMAN
27 Blastp_CBE 53.7563%-138 - C1 -6K3N 6.9
53 Blastp_CBE 53.1663%-133 - C1 -2E2R 6.9 ERR3_HUMAN
45 Blastp_CBE 53.0663%-137 - C1 -2P7G 6.8 ERR3_HUMAN
14 PsiBlast_PDB 52.8362%-136 - C1 -2EWP 8.1 ERR3_HUMAN
24 Blastp_CBE 52.4263%-138 - C1 -2EWP 7.4 ERR3_HUMAN
10 PsiBlast_PDB 52.0162%-135 - C1 -2GPP 7.7 ERR3_HUMAN
7 PsiBlast_PDB 51.9162%-143 - C1 -1KV6 - ERR3_HUMAN -
16 PsiBlast_PDB 51.6262%-139 - C1 -6I63 7.0 ERR3_HUMAN
15 PsiBlast_PDB 51.6262%-133 - C1 -6I62 6.2 ERR3_HUMAN
22 Blastp_CBE 50.5099%-149 - C1 -2PJL 9.3 ERR1_HUMAN
51 Blastp_CBE 50.1363%-131 - C1 -2ZKC 8.4 ERR3_HUMAN
20 PsiBlast_PDB 49.8759%-135 - C1 -6I66 4.7 ERR3_HUMAN
28 Blastp_CBE 49.5963%-128 - C1 -1S9P 7.1
3 PsiBlast_PDB 49.2899%-151 - C1 -2PJL 9.4 ERR1_HUMAN
18 PsiBlast_PDB 49.0259%-134 - C1 -6I64 6.4 ERR3_HUMAN
41 Blastp_CBE 47.5563%-127 - C1 -5YSO 9.4 ERR3_HUMAN
11 PsiBlast_PDB 47.3762%-138 - C1 -2GPU 7.9
5 PsiBlast_PDB 46.2262%-139 - C1 -5YSO 7.7 ERR3_HUMAN
17 PsiBlast_PDB 45.9759%-132 - C1 -6I61 7.4 ERR3_HUMAN
39 Blastp_CBE 43.5363%-129 - C1 -6A6K 8.1 ERR3_HUMAN
30 Blastp_CBE 42.4063%-128 - C1 -1S9P 6.8 ERR3_MOUSE
43 Blastp_CBE 42.3662%-132 - C1 -1S9Q 3.9 ERR3_MOUSE
6 PsiBlast_PDB 39.3362%-140 - C1 -6A6K 7.3 ERR3_HUMAN
54 Blastp_CBE 37.1765%-159 - C1 -6LIT 6.4 ERR2_HUMAN (first)
55 Blastp_CBE 36.8065%-163 - C1 -6LIT 6.4 ERR2_HUMAN
29 Blastp_CBE 36.0563%-125 - C1 -1S9P 5.8 ERR3_MOUSE
13 PsiBlast_PDB 29.4362%-122 - C1 -1S9P 7.0 ERR3_MOUSE
23 Blastp_CBE 29.2363%-146 - C1 -2EWP 8.0
42 Blastp_CBE 24.6062%-127 - C1 -1S9Q 4.0 ERR3_MOUSE
48 Blastp_CBE 23.1863%-132 - C1 -1VJB 6.9 ERR3_HUMAN
40 Blastp_CBE 22.7263%-129 - C1 -5YSO 7.0
47 Blastp_CBE 21.2963%-124 - C1 -1VJB 7.3 ERR3_HUMAN
44 Blastp_CBE 20.6963%-127 - C1 -2P7Z 8.0 ERR3_HUMAN
38 Blastp_CBE 12.4263%-129 - C1 -6A6K 4.2