@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR5A1_STF1: (2021-05-27 )
MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKAQIRANGFKLETGPPMGVPPPPPPAPDYVLPPSLHGPEPKGLAAGPPAGPLGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQPGLPYGYPEPFSGGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQAKQT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DR9_A_3(1YMT)
STF1_MOUSE
[Raw transfer]



PIZ_A_3(4QJR)
STF1_HUMAN
[Raw transfer]



PEF_F_6(1ZDT)
STF1_HUMAN
[Raw transfer]



PIK_A_3(4QK4)
STF1_HUMAN
[Raw transfer]



P0E_C_3(1YOW)
STF1_HUMAN
[Raw transfer]



PEF_E_5(1ZDT)
STF1_HUMAN
[Raw transfer]



PEF_C_3(1YP0)
STF1_MOUSE
[Raw transfer]



P42_A_3(3F7D)
STF1_MOUSE
[Raw transfer]



EPH_E_5(1YUC)
NR5A2_HUMAN
[Raw transfer]



EPH_A_5(4ONI)
NR5A2_HUMAN
[Raw transfer]



EPH_A_9(4PLE)
NR5A2_HUMAN
[Raw transfer]



P6L_B_3(3TX7)
NR5A2_HUMAN
[Raw transfer]



P3A_D_4(1ZDU)

[Raw transfer]



PIZ_A_3(4RWV)

[Raw transfer]



RJW_A_3(5UNJ)

[Raw transfer]



N1V_A_3(6OQX)

[Raw transfer]



RJW_A_3(5L11)

[Raw transfer]



N27_A_3(6OR1)

[Raw transfer]



N2J_A_3(6OQY)

[Raw transfer]
2 PsiBlast_PDB 95.5799%-160 - C1 -4QK4 9.2 STF1_HUMAN
1 PsiBlast_PDB 93.6799%-160 - C1 -4QJR 9.5 STF1_HUMAN
21 Blastp_CBE 85.6699%-160 - C1 -1ZDT 11.2 STF1_HUMAN
6 PsiBlast_PDB 81.9292%-161 - C1 -1YMT 11.9 STF1_MOUSE
3 PsiBlast_PDB 80.9699%-175 - C1 -1YOW 10.1 STF1_HUMAN
4 PsiBlast_PDB 73.4999%-169 - C1 -1ZDT 11.5 STF1_HUMAN
7 PsiBlast_PDB 71.5591%-162 - C1 -3F7D 11.6 STF1_MOUSE
16 PsiBlast_PDB 59.1759%-178 - C1 -5UNJ 6.0
5 PsiBlast_PDB 58.5693%-155 - C1 -1YP0 10.6 STF1_MOUSE
14 PsiBlast_PDB 52.5559% -42 - C1 -4PLE 9.9 NR5A2_HUMAN
9 PsiBlast_PDB 51.9359% -43 - C1 -4RWV 9.7
18 PsiBlast_PDB 51.0059% -42 - C1 -6OQY 7.0
13 PsiBlast_PDB 50.3759% -40 - C1 -4PLD - -
17 PsiBlast_PDB 50.1359% -42 - C1 -6OQX 6.7
10 PsiBlast_PDB 49.1659% -38 - C1 -4ONI 9.6 NR5A2_HUMAN
11 PsiBlast_PDB 44.5759% -34 - C1 -1YUC 9.4 NR5A2_HUMAN
19 PsiBlast_PDB 42.5659% -39 - C1 -6OR1 6.6
15 PsiBlast_PDB 40.7859% -42 - C1 -5L11 6.2
20 PsiBlast_PDB 32.9560% -52 * C1 *1ZDU 10.4
8 PsiBlast_PDB 20.2455% -58 - C1 -3TX7 10.0 NR5A2_HUMAN