@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR5A2_LRH1: (2021-05-27 )
MSSNSDTGDLQESLKHGLTPIGAGLPDRHGSPIPARGRLVMLPKVETEALGLARSHGEQGQMPENMQVSQFKMVNYSYDEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGLKLEAMSQVIQAMPSDLTISSAIQNIHSASKGLPLNHAALPPTDYDRSPFVTSPISMTMPPHGSLQGYQTYGHFPSRAIKSEYPDPYTSSPESIMGYSYMDSYQTSSPASIPHLILELLKCEPDEPQVQAKIMAYLQQEQANRSKHEKLSTFGLMCKMADQTLFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEMLHAKRA

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPH_B_5(4DOR)

[Raw transfer]



71W_A_3(5SYZ)

[Raw transfer]



RJW_A_3(5UNJ)

[Raw transfer]



EPH_A_9(4PLE)
NR5A2_HUMAN
[Raw transfer]



470_A_5(3PLZ)
NR5A2_HUMAN
[Raw transfer]



N27_A_3(6OR1)

[Raw transfer]



N2J_A_3(6OQY)

[Raw transfer]



RJW_A_3(5L11)

[Raw transfer]



QY4_A_3(6VIF)

[Raw transfer]



N1V_A_3(6OQX)

[Raw transfer]



EPH_F_6(1YUC)

[Raw transfer]



EPH_G_22(4PLE)

[Raw transfer]



EPH_E_16(4PLE)
NR5A2_HUMAN
[Raw transfer]



EPH_C_13(4PLE)
NR5A2_HUMAN
[Raw transfer]



EPH_A_5(4ONI)
NR5A2_HUMAN
[Raw transfer]



QU7_A_3(6VC2)

[Raw transfer]



470_B_7(3PLZ)

[Raw transfer]



P3A_D_4(1ZDU)

[Raw transfer]



P6L_B_9(4ONI)

[Raw transfer]



PEF_C_3(1YP0)
STF1_MOUSE
[Raw transfer]



P6L_B_3(3TX7)
NR5A2_HUMAN
[Raw transfer]



P0E_C_3(1YOW)
STF1_HUMAN
[Raw transfer]



PEF_E_5(1ZDT)
STF1_HUMAN
[Raw transfer]



PIZ_A_3(4RWV)

[Raw transfer]



P6L_D_4(1YOK)

[Raw transfer]



PIK_A_3(4QK4)
STF1_HUMAN
[Raw transfer]



PEF_F_6(1ZDT)
STF1_HUMAN
[Raw transfer]



PIZ_A_3(4QJR)
STF1_HUMAN
[Raw transfer]



PLC_A_6(4DOS)

[Raw transfer]
11 PsiBlast_PDB 97.5299%-164 - C1 -6OQX 8.1
21 Blastp_CBE 96.7399%-150 - C1 -4DOR 11.4
7 PsiBlast_PDB 96.5599%-158 - C1 -4PLD - -
2 PsiBlast_PDB 96.5499%-160 - C1 -1YUC - NR5A2_HUMAN -
23 Blastp_CBE 96.26100%-148 - C1 -4ONI 11.2
27 Blastp_CBE 96.1599%-171 - C1 -6VIF 8.8
26 Blastp_CBE 96.1099%-159 - C1 -4PLE 11.8 NR5A2_HUMAN
4 PsiBlast_PDB 96.08100%-155 - C1 -4ONI 10.7 NR5A2_HUMAN
29 Blastp_CBE 96.0499%-157 - C1 -3PLZ 8.6
28 Blastp_CBE 95.9999%-166 - C1 -6VC2 8.5
17 PsiBlast_PDB 95.9099%-156 - C1 -4DOS 9.7
13 PsiBlast_PDB 95.6399%-169 - C1 -6OR1 8.7
12 PsiBlast_PDB 95.6399%-163 - C1 -6OQY 8.2
8 PsiBlast_PDB 95.4099%-155 - C1 -4PLE 11.6 NR5A2_HUMAN
5 PsiBlast_PDB 95.3499%-148 - C1 -4RWV 10.6
22 Blastp_CBE 95.2999%-154 - C1 -1YUC 11.1
25 Blastp_CBE 95.2399%-158 - C1 -4PLE 12.0 NR5A2_HUMAN
24 Blastp_CBE 95.2299%-155 - C1 -4PLE 12.1
16 PsiBlast_PDB 94.8799%-161 - C1 -5SYZ 7.8
14 PsiBlast_PDB 94.7699%-170 - C1 -1YOK 11.7
9 PsiBlast_PDB 94.1999%-164 - C1 -5L11 8.1
6 PsiBlast_PDB 93.46100%-166 - C1 -1ZDU 12.2
15 PsiBlast_PDB 92.9399%-166 - C1 -3PLZ 8.2 NR5A2_HUMAN
10 PsiBlast_PDB 91.3199%-172 - C1 -5UNJ 8.2
1 PsiBlast_PDB 86.5899%-160 - C1 -3TX7 11.5 NR5A2_HUMAN
33 Blastp_CBE 75.2161%-146 - C1 -4QK4 9.0 STF1_HUMAN
32 Blastp_CBE 74.7661%-141 - C1 -1YP0 11.3 STF1_MOUSE
34 Blastp_CBE 74.5961%-146 * C1 *4QJR 9.4 STF1_HUMAN
35 Blastp_CBE 73.7961%-145 - C1 -1ZDT 11.2 STF1_HUMAN
37 Blastp_CBE 73.0761%-162 - C1 -1YOW 9.8 STF1_HUMAN
36 Blastp_CBE 72.0261%-158 - C1 -1ZDT 11.5 STF1_HUMAN