@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1B3_RARg: (2019-04-19 )
MATNKERLFAAGALGPGSGYPGAGFPFAFPGALRGSPPFEMLSPSFRGLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEMFEDDSSQPGPHPNASSEDEVPGGQGKGGLKSPA

Atome Classification :

(10 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

394_A_2(1EXA)
RARG_HUMAN
[Raw transfer]



184_A_2(1FCX)
RARG_HUMAN
[Raw transfer]



564_A_2(1FCY)
RARG_HUMAN
[Raw transfer]



REA_B_2(3LBD)
RARG_HUMAN
[Raw transfer]



156_A_2(1FCZ)
RARG_HUMAN
[Raw transfer]



254_A_2(1FD0)
RARG_HUMAN
[Raw transfer]



961_B_2(4LBD)
RARG_HUMAN
[Raw transfer]



961_A_2(1EXX)
RARG_HUMAN
[Raw transfer]



9CR_A_2(5M24)
RARG_HUMAN
[Raw transfer]



E9T_A_2(6FX0)
RARG_HUMAN
[Raw transfer]
1 PsiBlast_PDB 52.21100%-137 - C1 -6FX0 11.4 RARG_HUMAN
9 PsiBlast_PDB 51.07100%-138 - C1 -1FCY 11.2 RARG_HUMAN
12 PsiBlast_PDB 50.16100%-137 - C1 -1FD0 11.0 RARG_HUMAN
10 PsiBlast_PDB 49.84100%-137 - C1 -1FCX 11.4 RARG_HUMAN
11 PsiBlast_PDB 49.57100%-137 - C1 -1FCZ 10.6 RARG_HUMAN
6 PsiBlast_PDB 46.78100%-133 - C1 -1EXA 10.3 RARG_HUMAN
5 PsiBlast_PDB 46.32100%-131 - C1 -4LBD 10.6 RARG_HUMAN
7 PsiBlast_PDB 42.97100%-133 - C1 -1EXX 10.0 RARG_HUMAN
8 PsiBlast_PDB 41.6799%-134 - C1 -5M24 8.9 RARG_HUMAN
4 PsiBlast_PDB 37.79100%-125 - C1 -3LBD 8.8 RARG_HUMAN