@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1C2_PPARb: (2019-04-19 )
MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BOG_A_4(2XYW)
PPARD_HUMAN
[Raw transfer]



BOG_B_6(2XYW)
PPARD_HUMAN
[Raw transfer]



B7G_A_8(5U46)
PPARD_HUMAN
[Raw transfer]



B7G_B_7(5U45)
PPARD_HUMAN
[Raw transfer]



BOG_A_4(2XYX)
PPARD_HUMAN
[Raw transfer]



B7G_A_9(5U3V)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U41)
PPARD_HUMAN
[Raw transfer]



JZR_B_10(5Y7X)
PPARD_HUMAN
[Raw transfer]



B7G_B_9(5U43)
PPARD_HUMAN
[Raw transfer]



JZR_A_4(3PEQ)
PPARD_HUMAN
[Raw transfer]



B7G_B_10(5U40)
PPARD_HUMAN
[Raw transfer]



B7G_B_8(5U3X)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U3T)
PPARD_HUMAN
[Raw transfer]



B7G_A_7(5U44)
PPARD_HUMAN
[Raw transfer]



B7G_P_16(1Y0S)
PPARD_HUMAN
[Raw transfer]



B7G_A_6(2B50)
PPARD_HUMAN
[Raw transfer]



B7G_A_5(5U3R)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U3Z)
PPARD_HUMAN
[Raw transfer]



JZR_B_11(3PEQ)
PPARD_HUMAN
[Raw transfer]



B7G_D_4(2AWH)
PPARD_HUMAN
[Raw transfer]



B7G_B_15(5U3Q)
PPARD_HUMAN
[Raw transfer]



B7G_B_5(2ZNQ)
PPARD_HUMAN
[Raw transfer]



B7G_A_5(5U3W)
PPARD_HUMAN
[Raw transfer]



B7G_B_7(5U3U)
PPARD_HUMAN
[Raw transfer]



B7G_B_10(5U3S)
PPARD_HUMAN
[Raw transfer]



B7G_B_5(2ZNP)
PPARD_HUMAN
[Raw transfer]



B7G_A_3(5U42)
PPARD_HUMAN
[Raw transfer]



B7G_A_9(5U3Y)
PPARD_HUMAN
[Raw transfer]



1BO_A_5(3ET2)
PPARD_HUMAN
[Raw transfer]



B7G_Q_17(1Y0S)
PPARD_HUMAN
[Raw transfer]



BOG_B_6(2XYX)
PPARD_HUMAN
[Raw transfer]



1BO_A_4(3ET2)
PPARD_HUMAN
[Raw transfer]



WLM_B_7(2XYJ)
PPARD_HUMAN
[Raw transfer]



WLM_B_7(2XYJ)
PPARD_HUMAN
[Raw transfer]



B7G_A_9(5U42)
PPARD_HUMAN
[Raw transfer]



B7G_A_9(5U3V)
PPARD_HUMAN
[Raw transfer]



B7G_A_8(5U46)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U3T)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U3Z)
PPARD_HUMAN
[Raw transfer]



B7G_B_5(2ZNQ)
PPARD_HUMAN
[Raw transfer]



B7G_B_5(2ZNP)
PPARD_HUMAN
[Raw transfer]



B7G_B_7(5U45)
PPARD_HUMAN
[Raw transfer]



B7G_A_9(5U3Y)
PPARD_HUMAN
[Raw transfer]



B7G_B_8(5U3X)
PPARD_HUMAN
[Raw transfer]



B7G_B_15(5U3Q)
PPARD_HUMAN
[Raw transfer]



B7G_A_7(5U44)
PPARD_HUMAN
[Raw transfer]



B7G_A_5(5U3W)
PPARD_HUMAN
[Raw transfer]



B7G_B_12(5U41)
PPARD_HUMAN
[Raw transfer]



B7G_B_10(5U3S)
PPARD_HUMAN
[Raw transfer]



B7G_B_10(5U40)
PPARD_HUMAN
[Raw transfer]



B7G_A_5(5U3R)
PPARD_HUMAN
[Raw transfer]



B7G_B_9(5U43)
PPARD_HUMAN
[Raw transfer]



JZR_B_10(5Y7X)
PPARD_HUMAN
[Raw transfer]



B7G_A_6(2B50)
PPARD_HUMAN
[Raw transfer]



B7G_D_4(2BAW)
PPARD_HUMAN
[Raw transfer]



B7G_D_4(2AWH)
PPARD_HUMAN
[Raw transfer]
12 PsiBlast_PDB 80.38100%-164 - C1 -5U3R 4.4 PPARD_HUMAN
67 Blastp_CBE 79.3299%-160 - C1 -5U3T 3.5 PPARD_HUMAN
64 Blastp_CBE 78.4499%-165 - C1 -5U3V 3.8 PPARD_HUMAN
19 PsiBlast_PDB 78.40100%-157 - C1 -5U42 4.0 PPARD_HUMAN
13 PsiBlast_PDB 77.36100%-158 - C1 -5U3S 3.0 PPARD_HUMAN
15 PsiBlast_PDB 76.78100%-170 - C1 -5U3Y 3.1 PPARD_HUMAN
60 Blastp_CBE 76.4999%-170 - C1 -2B50 2.7 PPARD_HUMAN
16 PsiBlast_PDB 76.26100%-159 - C1 -5U3Z 2.9 PPARD_HUMAN
45 Blastp_CBE 75.97100%-165 - C1 -5U3Q 2.7 PPARD_HUMAN
11 PsiBlast_PDB 74.18100%-157 - C1 -5U3Q 3.9 PPARD_HUMAN
21 Blastp_CBE 74.1599%-166 - C1 -3ET2 2.8 PPARD_HUMAN
43 Blastp_CBE 73.37100%-166 - C1 -5U3S 3.7 PPARD_HUMAN
20 PsiBlast_PDB 73.31100%-158 - C1 -5U43 2.9 PPARD_HUMAN
4 PsiBlast_PDB 73.2599%-166 - C1 -3ET2 2.7 PPARD_HUMAN
29 Blastp_CBE 72.26100%-165 - C1 -5U46 3.0 PPARD_HUMAN
31 Blastp_CBE 71.90100%-160 - C1 -5U45 2.6 PPARD_HUMAN
61 Blastp_CBE 71.4399%-171 - C1 -2B50 4.4 PPARD_HUMAN
66 Blastp_CBE 71.3299%-161 - C1 -5U3T 4.3 PPARD_HUMAN
55 Blastp_CBE 70.07100%-166 - C1 -5Y7X 4.0 PPARD_HUMAN
6 PsiBlast_PDB 69.83100%-165 - C1 -2XYW 3.7 PPARD_HUMAN
35 Blastp_CBE 69.52100%-163 - C1 -5U43 4.1 PPARD_HUMAN
63 Blastp_CBE 69.4599%-159 * C1 *5U3W 4.5 PPARD_HUMAN
30 Blastp_CBE 69.29100%-164 - C1 -5U46 3.8 PPARD_HUMAN
36 Blastp_CBE 69.15100%-162 - C1 -5U42 4.3 PPARD_HUMAN
9 PsiBlast_PDB 69.09100%-165 - C1 -2ZNQ 2.3 PPARD_HUMAN
14 PsiBlast_PDB 69.08100%-165 - C1 -5U3X 2.7 PPARD_HUMAN
62 Blastp_CBE 67.7899%-167 - C1 -5U3W 3.8 PPARD_HUMAN
10 PsiBlast_PDB 67.66100%-168 - C1 -1Y0S 3.4 PPARD_HUMAN
7 PsiBlast_PDB 67.16100%-164 - C1 -2XYX 3.3 PPARD_HUMAN
24 Blastp_CBE 67.15100%-158 - C1 -2XYX 2.9 PPARD_HUMAN
25 Blastp_CBE 66.36100%-163 - C1 -2XYW 3.6 PPARD_HUMAN
47 Blastp_CBE 66.21100%-176 - C1 -3PEQ 3.1 PPARD_HUMAN
28 Blastp_CBE 65.86100%-165 - C1 -2ZNP 3.4 PPARD_HUMAN
56 Blastp_CBE 65.85100%-169 - C1 -5Y7X 2.6 PPARD_HUMAN
33 Blastp_CBE 65.20100%-163 - C1 -5U44 2.8 PPARD_HUMAN
27 Blastp_CBE 64.76100%-165 - C1 -2ZNQ 4.0 PPARD_HUMAN
26 Blastp_CBE 64.68100%-166 - C1 -2XYJ 2.0 PPARD_HUMAN
34 Blastp_CBE 64.16100%-169 - C1 -5U44 4.2 PPARD_HUMAN
32 Blastp_CBE 63.48100%-161 - C1 -5U45 3.8 PPARD_HUMAN
37 Blastp_CBE 63.43100%-162 - C1 -5U41 2.7 PPARD_HUMAN
65 Blastp_CBE 63.1299%-160 - C1 -5U3V 3.7 PPARD_HUMAN
8 PsiBlast_PDB 62.99100%-169 - C1 -2ZNP 2.5 PPARD_HUMAN
44 Blastp_CBE 62.40100%-169 - C1 -5U3R 2.8 PPARD_HUMAN
48 Blastp_CBE 62.34100%-172 - C1 -3PEQ 4.3 PPARD_HUMAN
5 PsiBlast_PDB 61.98100%-153 - C1 -2XYJ 4.5 PPARD_HUMAN
38 Blastp_CBE 61.95100%-163 - C1 -5U40 4.1 PPARD_HUMAN
39 Blastp_CBE 61.77100%-159 - C1 -5U3Z 4.4 PPARD_HUMAN
46 Blastp_CBE 61.55100%-167 - C1 -1Y0S 3.3 PPARD_HUMAN
40 Blastp_CBE 61.26100%-172 - C1 -5U3Y 2.9 PPARD_HUMAN
18 PsiBlast_PDB 61.20100%-161 - C1 -5U41 4.3 PPARD_HUMAN
17 PsiBlast_PDB 60.71100%-172 - C1 -5U40 2.9 PPARD_HUMAN
71 Blastp_CBE 55.9899%-177 - C1 -2AWH 3.6 PPARD_HUMAN
72 Blastp_CBE 55.3099%-172 - C1 -2AWH 2.8 PPARD_HUMAN
42 Blastp_CBE 52.71100%-174 - C1 -5U3U 3.3 PPARD_HUMAN
75 Blastp_CBE 50.3299%-178 - C1 -2BAW 2.9 PPARD_HUMAN
41 Blastp_CBE 47.92100%-168 - C1 -5U3X 3.7 PPARD_HUMAN