@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3C2_MCR: (2019-04-20 )
METKGYHSLPEGLDMERRWGQVSQAVERSSLGPTERTDENNYMEIVNVSCVSGAIPNNSTQGSSKEKQELLPCLQQDNNRPGILTSDIKTELESKELSATVAESMGLYMDSVRDADYSYEQQNQQGSMSPAKIYQNVEQLVKFYKGNGHRPSTLSCVNTPLRSFMSDSGSSVNGGVMRAIVKSPIMCHEKSPSVCSPLNMTSSVCSPAGINSVSSTTASFGSFPVHSPITQGTPLTCSPNAENRGSRSHSPAHASNVGSPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPVNNAFSYTASGTSAGSSTLRDVVPSPDTQEKGAQEVPFPKTEEVESAISNGVTGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSSFSVPIKQESTKHSCSGTSFKGNPTVNPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPVGIKQEPDDGSYYPEASIPSSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHGDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQSPEEGTTYIAPAKEPSVNTALVPQLSTISRALTPSPVMVLENIEPEIVYAGYDSSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTIMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPNNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESHALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C0R_C_3(2A3I)

[Raw transfer]




EYN_A_4(6GGG)
?
[Raw transfer]




1CA_D_4(1Y9R)

[Raw transfer]




1CA_E_5(2ABI)
MCR_HUMAN
[Raw transfer]




AS4_D_4(2AA2)

[Raw transfer]




CV7_A_6(4UDB)

[Raw transfer]




1CA_C_3(2AA7)

[Raw transfer]




DEX_A_4(4UDA)

[Raw transfer]




60R_A_4(5HCV)
MCR_HUMAN
[Raw transfer]




1CA_D_4(2ABI)
MCR_HUMAN
[Raw transfer]




1CA_C_3(1Y9R)
MCR_HUMAN
[Raw transfer]




1CA_F_6(2ABI)

[Raw transfer]




WFG_A_2(3WFG)

[Raw transfer]




EY8_A_4(6GG8)
?
[Raw transfer]




SNL_A_4(2AB2)
MCR_HUMAN
[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




HFN_A_2(4PF3)

[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




STR_A_3(2AA6)
MCR_HUMAN
[Raw transfer]




STR_B_4(2AA6)

[Raw transfer]




STR_B_4(2AA5)

[Raw transfer]




STR_F_6(1YA3)

[Raw transfer]




STR_D_4(1YA3)
MCR_HUMAN
[Raw transfer]




WFF_A_2(3WFF)

[Raw transfer]




STR_A_3(2AA5)
MCR_HUMAN
[Raw transfer]




6QE_A_4(5L7G)

[Raw transfer]




6Q0_A_8(5L7E)

[Raw transfer]




SNL_B_5(2AB2)

[Raw transfer]




STR_E_5(1YA3)
MCR_HUMAN
[Raw transfer]




LD2_A_3(3VHV)

[Raw transfer]




24 Blastp_CBE 81.9199%-137 - C1 -2AA6 8.2
22 Blastp_CBE 80.9099%-139 - C1 -2AB2 7.7
4 PsiBlast_PDB 80.3299%-136 - C1 -2AA6 8.2 MCR_HUMAN
6 PsiBlast_PDB 75.5599%-131 - C1 -2AB2 7.4 MCR_HUMAN
11 PsiBlast_PDB 71.9398%-139 - C1 -3VHV 8.8
3 PsiBlast_PDB 71.8199%-136 - C1 -2AA7 8.6
8 PsiBlast_PDB 69.8298%-123 - C1 -3WFF 7.2
2 PsiBlast_PDB 68.0399%-129 - C1 -2AA5 8.0 MCR_HUMAN
1 PsiBlast_PDB 67.9799%-138 - C1 -2AA2 8.7
21 Blastp_CBE 66.3299%-135 - C1 -2AA5 8.0
7 PsiBlast_PDB 65.7299%-140 - C1 -3VHU 9.6
13 PsiBlast_PDB 64.6499%-131 - C1 -2A3I 8.9
10 PsiBlast_PDB 56.3998%-125 - C1 -4PF3 9.1
9 PsiBlast_PDB 55.7898%-123 - C1 -3WFG 7.8
20 PsiBlast_PDB 47.8998%-134 - C1 -4UDB 10.8
36 Blastp_CBE 47.0799%-131 - C1 -5L7G 7.9
37 Blastp_CBE 45.9199%-141 - C1 -5L7E 6.7
18 PsiBlast_PDB 45.3099%-147 - C1 -4UDA 8.8
19 PsiBlast_PDB 40.7299%-135 - C1 -6GG8 8.0 ?
29 Blastp_CBE 37.9099%-143 - C1 -1Y9R 8.5
12 PsiBlast_PDB 34.8899%-159 - C1 -2ABI 8.8 MCR_HUMAN
14 PsiBlast_PDB 34.3999%-149 - C1 -1Y9R 7.8 MCR_HUMAN
15 PsiBlast_PDB 33.9799%-154 - C1 -1YA3 7.8 MCR_HUMAN
26 Blastp_CBE 33.8599%-145 - C1 -2ABI 8.8 MCR_HUMAN
25 Blastp_CBE 31.4399%-146 - C1 -2ABI 8.1
35 Blastp_CBE 31.2999%-140 - C1 -6GGG 10.2 ?
17 PsiBlast_PDB 31.1799%-140 - C1 -5HCV 9.9 MCR_HUMAN
27 Blastp_CBE 30.0499%-150 - C1 -1YA3 6.8
28 Blastp_CBE 29.3199%-154 - C1 -1YA3 7.7 MCR_HUMAN