@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR4A2_NURR1: (2019-04-20 )
MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF

Atome Classification :

(9 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RPG_B_8(5Y41)

[Raw transfer]



8SU_A_5(5YD6)
?
[Raw transfer]



8SU_C_9(5YD6)
?
[Raw transfer]



8SU_D_10(5YD6)
?
[Raw transfer]



RPG_A_3(5Y41)
NR4A2_HUMAN
[Raw transfer]



8SU_B_8(5YD6)
?
[Raw transfer]



G7J_C_18(6DDA)
?
[Raw transfer]



G7J_B_5(6DDA)
?
[Raw transfer]



G7J_A_13(6DDA)
?
[Raw transfer]
2 PsiBlast_PDB 78.67100%-172 - C1 -5Y41 4.5 NR4A2_HUMAN
25 Blastp_CBE 75.79100%-174 - C1 -5Y41 4.7
1 PsiBlast_PDB 70.26100%-162 - C1 -6DDA 1.8 ?
3 PsiBlast_PDB 70.04100%-184 - C1 -5YD6 4.2 ?
22 Blastp_CBE 67.05100%-177 - C1 -5YD6 5.5 ?
24 Blastp_CBE 65.39100%-185 - C1 -5YD6 4.6 ?
23 Blastp_CBE 63.20100%-172 - C1 -5YD6 5.5 ?
21 Blastp_CBE 62.10100%-173 - C1 -6DDA 2.1 ?
26 Blastp_CBE 60.8799%-169 * C1 *6DDA 3.2 ?