@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1A2_THRb: (2019-08-14 )
MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQTTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PFA_D_4(1N46)
THB_HUMAN
[Raw transfer]




PFA_C_3(1N46)
THB_HUMAN
[Raw transfer]




IH5_A_2(1NAX)
THB_HUMAN
[Raw transfer]




G24_B_2(1Q4X)
THB_HUMAN
[Raw transfer]




OEF_A_2(2J4A)
THB_HUMAN
[Raw transfer]




T3_X_4(4ZO1)
THB_HUMAN
[Raw transfer]




T3_X_2(3GWS)
THB_HUMAN
[Raw transfer]




T3_X_8(1XZX)
THB_HUMAN
[Raw transfer]




B72_A_2(3IMY)
THB_HUMAN
[Raw transfer]




4HY_A_2(3JZC)
THB_HUMAN
[Raw transfer]




T3_E_5(1BSX)
THB_HUMAN
[Raw transfer]




T3_F_6(1BSX)
THB_HUMAN
[Raw transfer]




4HY_A_3(3D57)
THB_HUMAN
[Raw transfer]




4HY_A_4(2PIN)
THB_HUMAN
[Raw transfer]




4HY_A_2(1NQ1)
THB_HUMAN
[Raw transfer]




4HY_A_3(1NQ2)
THB_HUMAN
[Raw transfer]




T44_X_8(1Y0X)
THB_HUMAN
[Raw transfer]




4HY_B_2(1NUO)
THB_HUMAN
[Raw transfer]




4HY_A_2(1NQ0)
THB_HUMAN
[Raw transfer]




4HY_B_4(3D57)
THB_HUMAN
[Raw transfer]




4HY_B_6(2PIN)
THB_HUMAN
[Raw transfer]




442_A_2(1R6G)
THB_HUMAN
[Raw transfer]




14 PsiBlast_PDB 77.7899%-140 - C1 -2J4A 9.5 THB_HUMAN
6 PsiBlast_PDB 74.2899%-136 - C1 -1NQ2 7.7 THB_HUMAN
24 Blastp_CBE 74.1199%-143 - C1 -3D57 8.3 THB_HUMAN
4 PsiBlast_PDB 72.7599%-150 - C1 -1NQ0 8.7 THB_HUMAN
15 PsiBlast_PDB 71.61100%-143 - C1 -1NAX 8.7 THB_HUMAN
12 PsiBlast_PDB 71.0598%-150 - C1 -3GWS 8.8 THB_HUMAN
23 Blastp_CBE 68.1099%-142 - C1 -2PIN 8.7 THB_HUMAN
18 PsiBlast_PDB 67.4399%-148 - C1 -3D57 9.1 THB_HUMAN
17 PsiBlast_PDB 67.2699%-144 - C1 -2PIN 9.1 THB_HUMAN
2 PsiBlast_PDB 66.07100%-146 - C1 -1XZX 8.9 THB_HUMAN
3 PsiBlast_PDB 63.89100%-142 - C1 -1Y0X 8.6 THB_HUMAN
11 PsiBlast_PDB 61.7198%-140 - C1 -3JZC 8.7 THB_HUMAN
8 PsiBlast_PDB 57.9199%-146 - C1 -1NUO 6.1 THB_HUMAN
5 PsiBlast_PDB 57.4199%-138 - C1 -1NQ1 8.6 THB_HUMAN
10 PsiBlast_PDB 57.3798%-136 - C1 -3IMY 8.7 THB_HUMAN
7 PsiBlast_PDB 54.14100%-140 - C1 -1N46 9.6 THB_HUMAN
9 PsiBlast_PDB 50.7999%-155 - C1 -1R6G 10.7 THB_HUMAN
13 PsiBlast_PDB 49.47100%-148 - C1 -1Q4X 9.9 THB_HUMAN
22 Blastp_CBE 48.42100%-154 * C1 *1N46 9.3 THB_HUMAN
16 PsiBlast_PDB 46.92100%-144 - C1 -4ZO1 8.9 THB_HUMAN
1 PsiBlast_PDB 44.13100%-148 - C1 -1BSX 8.3 THB_HUMAN
21 Blastp_CBE 42.28100%-148 - C1 -1BSX 8.2 THB_HUMAN