@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1I2_PXR: (2019-08-14 )
MEVRPKESWNHADFVHCEDTESVPGKPSVNADEEVGGPQICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGSVWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWECGRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGITGS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

40U_A_5(4S0T)
NR1I2_HUMAN
[Raw transfer]



40U_B_6(4S0T)
NR1I2_HUMAN
[Raw transfer]



40U_A_3(4XHD)
NR1I2_HUMAN
[Raw transfer]



2Q4_A_2(4NY9)
NR1I2_HUMAN
[Raw transfer]



SRL_A_3(3HVL)
NCOA1_HUMAN
[Raw transfer]



SRL_A_5(1NRL)
NR1I2_HUMAN
[Raw transfer]



SRL_B_6(1NRL)
NR1I2_HUMAN
[Raw transfer]



SRL_B_4(3HVL)
NR1I2_HUMAN
[Raw transfer]



444_F_6(2O9I)
NR1I2_HUMAN
[Raw transfer]



444_E_5(2O9I)
NR1I2_HUMAN
[Raw transfer]



RFP_B_2(1SKX)
NR1I2_HUMAN
[Raw transfer]



SRL_A_2(1ILH)
NR1I2_HUMAN
[Raw transfer]



4WH_B_6(5X0R)
NR1I2_HUMAN
[Raw transfer]



SRL_B_6(4J5X)
NCOA1_HUMAN
[Raw transfer]



4WH_A_5(5X0R)
NR1I2_HUMAN
[Raw transfer]



SRL_A_5(4J5X)
NCOA1_HUMAN
[Raw transfer]



CDZ_A_2(2QNV)
NR1I2_HUMAN
[Raw transfer]



HCJ_A_3(6DUP)
NR1I2_HUMAN
[Raw transfer]



XGH_B_4(6BNS)
NR1I2_HUMAN
[Raw transfer]



D7E_B_6(5A86)
NR1I2_HUMAN
[Raw transfer]



3WF_A_2(4X1F)
NR1I2_HUMAN
[Raw transfer]



D7E_A_5(5A86)
NR1I2_HUMAN
[Raw transfer]



PNU_A_2(3R8D)
NR1I2_HUMAN
[Raw transfer]



XGH_A_3(6BNS)
NCOA1_HUMAN
[Raw transfer]



3WG_A_3(4X1G)
NR1I2_HUMAN
[Raw transfer]
17 PsiBlast_PDB 80.38100%-152 - C1 -4X1G 6.3 NR1I2_HUMAN
24 Blastp_CBE 78.72100%-157 - C1 -4S0T 8.5 NR1I2_HUMAN
13 PsiBlast_PDB 77.34100%-153 - C1 -1NRL 7.8 NR1I2_HUMAN
6 PsiBlast_PDB 75.68100%-156 - C1 -6BNS 6.3 NCOA1_HUMAN (first)
16 PsiBlast_PDB 73.82100%-150 - C1 -4X1F 7.4 NR1I2_HUMAN
27 Blastp_CBE 72.67100%-152 - C1 -5A86 7.4 NR1I2_HUMAN
5 PsiBlast_PDB 71.47100%-159 - C1 -6DUP 7.0 NR1I2_HUMAN
8 PsiBlast_PDB 71.28100%-157 - C1 -4S0T 8.4 NR1I2_HUMAN
25 Blastp_CBE 70.58100%-155 - C1 -1NRL 8.1 NR1I2_HUMAN
30 Blastp_CBE 70.4499%-143 - C1 -2O9I 6.6 NR1I2_HUMAN
29 Blastp_CBE 70.3999%-142 - C1 -2O9I 7.6 NR1I2_HUMAN
2 PsiBlast_PDB 69.76100%-150 - C1 -4J5X 7.3 NCOA1_HUMAN (first)
23 Blastp_CBE 69.15100%-157 - C1 -6BNS 9.0 NR1I2_HUMAN
4 PsiBlast_PDB 68.72100%-150 - C1 -3HVL 9.1 NCOA1_HUMAN (first)
7 PsiBlast_PDB 67.84100%-161 - C1 -4XHD 8.6 NR1I2_HUMAN
20 PsiBlast_PDB 65.03100%-154 - C1 -5A86 6.9 NR1I2_HUMAN
22 Blastp_CBE 64.67100%-147 - C1 -3HVL 8.8 NR1I2_HUMAN
21 Blastp_CBE 60.40100%-145 - C1 -4J5X 5.5 NCOA1_HUMAN (first)
11 PsiBlast_PDB 56.14100%-151 - C1 -1ILH 5.8 NR1I2_HUMAN
31 Blastp_CBE 52.68100%-161 * C1 *4NY9 8.5 NR1I2_HUMAN
26 Blastp_CBE 46.28100%-160 - C1 -5X0R 7.8 NR1I2_HUMAN
15 PsiBlast_PDB 41.61100%-152 - C1 -3R8D 4.4 NR1I2_HUMAN
28 Blastp_CBE 29.15100%-163 - C1 -1SKX 9.3 NR1I2_HUMAN
14 PsiBlast_PDB 27.30100%-160 - C1 -2QNV 5.7 NR1I2_HUMAN
19 PsiBlast_PDB 21.65100%-172 - C1 -5X0R 7.7 NR1I2_HUMAN