@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR5A1_STF1: (2019-08-15 )
MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKAQIRANGFKLETGPPMGVPPPPPPAPDYVLPPSLHGPEPKGLAAGPPAGPLGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQPGLPYGYPEPFSGGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQAKQT

Atome Classification :

(8 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PIK_A_3(4QK4)
STF1_HUMAN
[Raw transfer]




DR9_A_3(1YMT)
STF1_MOUSE
[Raw transfer]




PIZ_A_3(4QJR)
STF1_HUMAN
[Raw transfer]




P42_A_3(3F7D)
STF1_MOUSE
[Raw transfer]




PEF_E_5(1ZDT)
STF1_HUMAN
[Raw transfer]




P0E_C_3(1YOW)
STF1_HUMAN
[Raw transfer]




PEF_F_6(1ZDT)
STF1_HUMAN
[Raw transfer]




PEF_C_3(1YP0)
STF1_MOUSE
[Raw transfer]




2 PsiBlast_PDB 95.7799%-160 - C1 -4QK4 9.2 STF1_HUMAN
1 PsiBlast_PDB 93.8799%-160 - C1 -4QJR 9.5 STF1_HUMAN
21 Blastp_CBE 85.7299%-160 - C1 -1ZDT 11.2 STF1_HUMAN
6 PsiBlast_PDB 82.0592%-161 - C1 -1YMT 11.9 STF1_MOUSE
3 PsiBlast_PDB 81.0799%-175 - C1 -1YOW 10.1 STF1_HUMAN
4 PsiBlast_PDB 73.5799%-169 - C1 -1ZDT 11.5 STF1_HUMAN
7 PsiBlast_PDB 71.5791%-162 - C1 -3F7D 11.6 STF1_MOUSE
5 PsiBlast_PDB 58.6393%-155 - C1 -1YP0 10.6 STF1_MOUSE