@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : X_NR1C2_PPARD: (2019-06-04 )
MKEEIPPRSPILDEQPSTPLEHQETSQSVDCKICGDRASGFHYGVHACEGCKGFFRRTIRMRLQYEHCDRNCKIQKKNRNKCQYCRFNKCLSLGMSHNAIRFGRMPESEKRKLVQAPVSDSAAPDSPVSDLDVLSQLIHSSYMNTFTMTKKRARDILTGRNSISPFVIHDMDTLWQAEQGTVWEQLPTQNLTGTEIGVHVFYRCQCTSVETVRALTDFAKRIPGFGTLYLNDQVTLLKYGVHEAIFCMLASLMNKDGLLVAGGRGFVTREFLRSLRQPFCHIMEPKFHFASKFNALELNDSDLALFVASIILCGDRPGLINPSQVEDIQEGILGALRRHLKASHTDAPFLFPKLLHKMADLRQLVTEHAELVQSIKRTESSAALHPLLQEIYRDMY

Atome Classification :

(99 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IL2_A_3(3SP9)
PPARD_HUMAN
[Raw transfer]




IL2_B_4(3SP9)
PPARD_HUMAN
[Raw transfer]




S44_A_2(2ZNN)
PPARA_HUMAN
[Raw transfer]




L41_B_4(3D5F)
PPARD_HUMAN
[Raw transfer]




7UG_B_13(5U41)
PPARD_HUMAN
[Raw transfer]




3EQ_A_3(3PEQ)
PPARD_HUMAN
[Raw transfer]




Y1N_A_2(4CI4)
PPARA_HUMAN
[Raw transfer]




VCA_A_7(2B50)
PPARD_HUMAN
[Raw transfer]




IL2_A_3(3SP6)
PPARA_HUMAN
[Raw transfer]




3EQ_B_10(3PEQ)
PPARD_HUMAN
[Raw transfer]




735_C_3(2P54)
PPARA_HUMAN
[Raw transfer]




7V4_B_11(5U3S)
PPARD_HUMAN
[Raw transfer]




VCA_F_6(2BAW)
PPARD_HUMAN
[Raw transfer]




7UG_A_3(5U41)
PPARD_HUMAN
[Raw transfer]




VCA_E_5(2AWH)
PPARD_HUMAN
[Raw transfer]




8RR_B_8(5Y7X)
PPARD_HUMAN
[Raw transfer]




7UA_B_13(5U3Z)
PPARD_HUMAN
[Raw transfer]




7SM_A_4(5U42)
PPARD_HUMAN
[Raw transfer]




7U1_A_4(5U3W)
PPARD_HUMAN
[Raw transfer]




VCA_B_8(2B50)
PPARD_HUMAN
[Raw transfer]




L41_A_3(3D5F)
PPARD_HUMAN
[Raw transfer]




7SM_B_11(5U42)
PPARD_HUMAN
[Raw transfer]




7V4_A_3(5U3S)
PPARD_HUMAN
[Raw transfer]




7UD_A_3(5U40)
PPARD_HUMAN
[Raw transfer]




7SY_B_8(5U45)
PPARD_HUMAN
[Raw transfer]




7UD_B_11(5U40)
PPARD_HUMAN
[Raw transfer]




7U4_B_9(5U3X)
PPARD_HUMAN
[Raw transfer]




7U1_B_10(5U3W)
PPARD_HUMAN
[Raw transfer]




EDK_A_2(6FZG)
?
[Raw transfer]




7SS_A_3(5U43)
PPARD_HUMAN
[Raw transfer]




89L_B_4(5XMX)
PPARD_HUMAN
[Raw transfer]




7U4_A_3(5U3X)
PPARD_HUMAN
[Raw transfer]




7UA_A_3(5U3Z)
PPARD_HUMAN
[Raw transfer]




89L_A_3(5XMX)
PPARD_HUMAN
[Raw transfer]




7UJ_A_3(5U3Q)
PPARD_HUMAN
[Raw transfer]




7TY_B_11(5U3V)
PPARD_HUMAN
[Raw transfer]




7TY_A_4(5U3V)
PPARD_HUMAN
[Raw transfer]




7SY_A_4(5U45)
PPARD_HUMAN
[Raw transfer]




7SV_B_9(5U44)
PPARD_HUMAN
[Raw transfer]




VCA_F_6(2AWH)
PPARD_HUMAN
[Raw transfer]




7UY_B_11(5U3T)
PPARD_HUMAN
[Raw transfer]




7T1_A_7(5U46)
PPARD_HUMAN
[Raw transfer]




GNI_B_4(2J14)
PPARD_HUMAN
[Raw transfer]




3OZ_A_2(3OZ0)
PPARD_HUMAN
[Raw transfer]




GW0_A_2(3TKM)
PPARD_HUMAN
[Raw transfer]




7SV_A_6(5U44)
PPARD_HUMAN
[Raw transfer]




7UY_A_3(5U3T)
PPARD_HUMAN
[Raw transfer]




NKS_A_3(3KDU)
PPARA_HUMAN
[Raw transfer]




7T1_B_10(5U46)
PPARD_HUMAN
[Raw transfer]




7U7_A_4(5U3Y)
PPARD_HUMAN
[Raw transfer]




8RR_A_3(5Y7X)
PPARD_HUMAN
[Raw transfer]




13M_A_2(3VI8)
PPARA_HUMAN
[Raw transfer]




7SS_B_10(5U43)
PPARD_HUMAN
[Raw transfer]




7V1_A_4(5U3R)
PPARD_HUMAN
[Raw transfer]




331_O_15(1Y0S)
PPARD_HUMAN
[Raw transfer]




7V1_B_14(5U3R)
PPARD_HUMAN
[Raw transfer]




331_N_14(1Y0S)
PPARD_HUMAN
[Raw transfer]




7U7_B_10(5U3Y)
PPARD_HUMAN
[Raw transfer]




NKS_B_4(3KDU)
PPARA_HUMAN
[Raw transfer]




401_B_6(2ZNQ)
PPARD_HUMAN
[Raw transfer]




K55_A_4(2ZNP)
PPARD_HUMAN
[Raw transfer]




K55_B_6(2ZNP)
PPARD_HUMAN
[Raw transfer]




401_A_4(2ZNQ)
PPARD_HUMAN
[Raw transfer]




7UJ_B_14(5U3Q)
PPARD_HUMAN
[Raw transfer]




3EA_D_4(2ATH)
PPARG_HUMAN
[Raw transfer]




ET1_B_7(3ET2)
PPARD_HUMAN
[Raw transfer]




GNI_A_3(2J14)
PPARD_HUMAN
[Raw transfer]




ET1_B_6(3ET1)
PPARA_HUMAN
[Raw transfer]




ET1_A_5(3ET1)
PPARA_HUMAN
[Raw transfer]




CTM_A_3(3FEI)
PPARA_HUMAN
[Raw transfer]




7HA_A_3(3KDT)
PPARA_HUMAN
[Raw transfer]




RO7_A_3(3G8I)
PPARA_HUMAN
[Raw transfer]




4M5_A_4(5AZT)
PPARA_HUMAN
[Raw transfer]




7HA_B_4(3KDT)
PPARA_HUMAN
[Raw transfer]




DY6_B_5(3DY6)
PPARD_HUMAN
[Raw transfer]




WLM_A_3(2XYJ)
PPARD_HUMAN
[Raw transfer]




DY6_A_4(3DY6)
PPARD_HUMAN
[Raw transfer]




WLM_B_6(2XYJ)
PPARD_HUMAN
[Raw transfer]




EPA_A_3(3GWX)
PPARD_HUMAN
[Raw transfer]




4M5_B_5(5AZT)
PPARA_HUMAN
[Raw transfer]




EPA_A_3(3GWX)
PPARD_HUMAN
[Raw transfer]




ET1_A_3(3ET2)
PPARD_HUMAN
[Raw transfer]




1FA_A_3(2Q5G)
PPARD_HUMAN
[Raw transfer]




Z00_A_3(2XYX)
PPARD_HUMAN
[Raw transfer]




13M_A_2(3VI8)
PPARA_HUMAN
[Raw transfer]




08S_A_3(2XYW)
PPARD_HUMAN
[Raw transfer]




08S_B_5(2XYW)
PPARD_HUMAN
[Raw transfer]




Z00_B_5(2XYX)
PPARD_HUMAN
[Raw transfer]




471_K_11(1KKQ)
PPARA_HUMAN
[Raw transfer]




EPA_B_4(3GWX)
PPARD_HUMAN
[Raw transfer]




1FA_B_4(2Q5G)
PPARD_HUMAN
[Raw transfer]




KRC_A_3(3B1M)
PPARG_HUMAN
[Raw transfer]




471_L_12(1KKQ)
PPARA_HUMAN
[Raw transfer]




471_I_9(1KKQ)
PPARA_HUMAN
[Raw transfer]




471_J_10(1KKQ)
PPARA_HUMAN
[Raw transfer]




GW9_D_12(3E00)
PPARG_HUMAN
[Raw transfer]




471_K_11(1KKQ)
PPARA_HUMAN
[Raw transfer]




WY1_B_8(4BCR)
PPARA_HUMAN
[Raw transfer]




WY1_A_5(4BCR)
PPARA_HUMAN
[Raw transfer]




59 Blastp_CBE 84.7570%-170 - C8 -5Y7X 10.1 PPARD_HUMAN
73 Blastp_CBE 84.5869%-170 - C8 -5U3V 10.5 PPARD_HUMAN
23 Blastp_CBE 84.4970%-183 - C8 -3DY6 7.8 PPARD_HUMAN
8 PsiBlast_PDB 84.3769%-183 - C8 -3DY6 7.8 PPARD_HUMAN
45 Blastp_CBE 84.2770%-164 - C8 -5U3Q 10.2 PPARD_HUMAN
26 Blastp_CBE 84.1370%-166 - C8 -2XYW 9.8 PPARD_HUMAN
21 Blastp_CBE 84.1270%-179 - C8 -3PEQ 10.1 PPARD_HUMAN
56 Blastp_CBE 84.0670%-174 - C8 -3OZ0 9.3 PPARD_HUMAN
2 PsiBlast_PDB 84.0558% -6 - C8 -3E00 4.3 PPARG_HUMAN
36 Blastp_CBE 83.8570%-162 - C8 -5U42 9.9 PPARD_HUMAN
4 PsiBlast_PDB 83.7969%-167 - C8 -2XYW 9.6 PPARD_HUMAN
27 Blastp_CBE 83.6070%-170 - C8 -2XYJ 7.7 PPARD_HUMAN
52 Blastp_CBE 83.5770%-168 - C8 -2ZNQ 8.7 PPARD_HUMAN
12 PsiBlast_PDB 83.5569%-171 - C8 -1Y0S 9.3 PPARD_HUMAN
28 Blastp_CBE 83.4570%-165 - C8 -5U46 9.2 PPARD_HUMAN
44 Blastp_CBE 83.4170%-171 - C8 -5U3R 9.8 PPARD_HUMAN
9 PsiBlast_PDB 83.3469%-176 - C8 -3PEQ 10.0 PPARD_HUMAN
34 Blastp_CBE 83.2870%-165 - C8 -5U43 10.7 PPARD_HUMAN
35 Blastp_CBE 83.2670%-160 - C8 -5U43 10.7 PPARD_HUMAN
29 Blastp_CBE 83.1070%-165 - C8 -5U46 8.7 PPARD_HUMAN
69 Blastp_CBE 83.0770%-172 - C8 -3D5F 8.7 PPARD_HUMAN
43 Blastp_CBE 82.9970%-165 - C8 -5U3S 9.4 PPARD_HUMAN
74 Blastp_CBE 82.8869%-161 - C8 -5U3V 10.8 PPARD_HUMAN
72 Blastp_CBE 82.8869%-159 - C8 -5U3W 10.6 PPARD_HUMAN
39 Blastp_CBE 82.8770%-161 - C8 -5U3Z 9.7 PPARD_HUMAN
37 Blastp_CBE 82.8570%-164 - C8 -5U41 9.5 PPARD_HUMAN
50 Blastp_CBE 82.7470%-175 - C8 -5XMX 9.4 PPARD_HUMAN
46 Blastp_CBE 82.7470%-169 - C8 -1Y0S 9.1 PPARD_HUMAN
31 Blastp_CBE 82.7370%-162 - C8 -5U45 10.1 PPARD_HUMAN
71 Blastp_CBE 82.6769%-166 - C8 -5U3W 10.6 PPARD_HUMAN
25 Blastp_CBE 82.6370%-161 - C8 -2XYX 7.8 PPARD_HUMAN
75 Blastp_CBE 82.5769%-160 - C8 -5U3T 10.1 PPARD_HUMAN
18 PsiBlast_PDB 82.4669%-175 - C8 -5U40 10.6 PPARD_HUMAN
40 Blastp_CBE 82.3970%-175 - C8 -5U3Y 9.1 PPARD_HUMAN
64 Blastp_CBE 82.3170%-177 - C8 -2AWH 6.4 PPARD_HUMAN
5 PsiBlast_PDB 82.1169%-167 - C8 -2XYX 7.6 PPARD_HUMAN
68 Blastp_CBE 82.0470%-174 - C8 -3D5F 8.5 PPARD_HUMAN
19 PsiBlast_PDB 82.0369%-163 - C8 -5U41 10.4 PPARD_HUMAN
41 Blastp_CBE 81.0670%-172 - C8 -5U3X 9.3 PPARD_HUMAN
70 Blastp_CBE 81.0070%-180 - C8 -2BAW 6.7 PPARD_HUMAN
49 Blastp_CBE 79.8770%-177 - C8 -5XMX 9.8 PPARD_HUMAN
57 Blastp_CBE 79.7370%-162 - C8 -2J14 9.0 PPARD_HUMAN
62 Blastp_CBE 78.6270% -84 - C8 -3SP9 7.8 PPARD_HUMAN
63 Blastp_CBE 78.4770% -80 - C8 -3SP9 8.2 PPARD_HUMAN
13 PsiBlast_PDB 78.3969% -82 - C8 -5U3R 9.7 PPARD_HUMAN
100 Blastp_CBE 78.0365% -81 - C8 -3ET1 5.9 PPARA_HUMAN
10 PsiBlast_PDB 78.0269% -86 - C8 -3ET2 7.0 PPARD_HUMAN
76 Blastp_CBE 77.9469% -82 - C8 -5U3T 10.3 PPARD_HUMAN
14 PsiBlast_PDB 77.7269% -77 - C8 -5U3S 9.6 PPARD_HUMAN
51 Blastp_CBE 77.5170% -82 - C8 -3TKM 8.8 PPARD_HUMAN
20 PsiBlast_PDB 77.3569% -74 - C8 -5U42 10.0 PPARD_HUMAN
67 Blastp_CBE 77.1370% -79 - C8 -2B50 6.8 PPARD_HUMAN
16 PsiBlast_PDB 77.1269% -84 - C8 -5U3Y 9.6 PPARD_HUMAN
3 PsiBlast_PDB 77.0369% -78 - C8 -2XYJ 7.8 PPARD_HUMAN
22 Blastp_CBE 76.9470% -83 - C8 -3GWX 5.7 PPARD_HUMAN
82 Blastp_CBE 76.7665% -77 - C8 -3KDT 7.0 PPARA_HUMAN
48 Blastp_CBE 76.6870% -80 - C8 -3ET2 6.7 PPARD_HUMAN
66 Blastp_CBE 76.6770% -82 - C8 -2B50 7.4 PPARD_HUMAN
80 Blastp_CBE 76.6565% -79 - C8 -3KDU 9.5 PPARA_HUMAN
17 PsiBlast_PDB 76.6469% -78 - C8 -5U3Z 9.6 PPARD_HUMAN
7 PsiBlast_PDB 76.6069% -81 - C8 -3GWX 6.4 PPARD_HUMAN
53 Blastp_CBE 76.5270% -84 - C8 -2ZNQ 8.7 PPARD_HUMAN
38 Blastp_CBE 76.4370% -85 - C8 -5U40 10.4 PPARD_HUMAN
60 Blastp_CBE 76.1970% -86 - C8 -5Y7X 10.2 PPARD_HUMAN
47 Blastp_CBE 75.9470%-181 - C8 -2Q5G 11.1 PPARD_HUMAN
30 Blastp_CBE 75.9170% -78 - C8 -5U45 9.8 PPARD_HUMAN
32 Blastp_CBE 75.8870% -79 - C8 -5U44 9.2 PPARD_HUMAN
15 PsiBlast_PDB 75.7569% -83 - C8 -5U3X 9.8 PPARD_HUMAN
88 Blastp_CBE 75.7464% -82 - C8 -3SP6 7.6 PPARA_HUMAN
54 Blastp_CBE 75.2470% -84 - C8 -2ZNP 9.7 PPARD_HUMAN
97 Blastp_CBE 75.2266% -87 - C8 -2P54 7.6 PPARA_HUMAN
55 Blastp_CBE 74.7870% -78 - C8 -2ZNP 7.8 PPARD_HUMAN
65 Blastp_CBE 74.7470% -87 - C8 -2AWH 7.1 PPARD_HUMAN
81 Blastp_CBE 74.5765% -81 - C8 -3KDU 11.3 PPARA_HUMAN
58 Blastp_CBE 74.5270% -80 - C8 -2J14 10.1 PPARD_HUMAN
33 Blastp_CBE 74.3070% -81 - C8 -5U44 9.2 PPARD_HUMAN
83 Blastp_CBE 74.1965% -82 - C8 -3KDT 7.5 PPARA_HUMAN
79 Blastp_CBE 74.0465% -71 - C8 -4BCR 6.0 PPARA_HUMAN
103 Blastp_CBE 74.0365% -85 - C8 -5AZT 6.6 PPARA_HUMAN
94 Blastp_CBE 73.8665% -87 - C8 -3VI8 9.3 PPARA_HUMAN
95 Blastp_CBE 73.8465% -90 - C8 -2ZNN 9.5 PPARA_HUMAN
78 Blastp_CBE 73.4765% -77 - C8 -4BCR 5.3 PPARA_HUMAN
11 PsiBlast_PDB 73.0869%-158 - C8 -2Q5G 11.3 PPARD_HUMAN
93 Blastp_CBE 73.0265% -95 - C8 -3G8I 7.9 PPARA_HUMAN
101 Blastp_CBE 72.4965% -84 - C8 -3ET1 7.1 PPARA_HUMAN
91 Blastp_CBE 72.4465% -79 - C8 -1KKQ 10.1 PPARA_HUMAN
89 Blastp_CBE 72.4165% -88 - C8 -1KKQ 10.0 PPARA_HUMAN
102 Blastp_CBE 71.9465% -83 - C8 -5AZT 4.3 PPARA_HUMAN
77 Blastp_CBE 71.7765% -86 - C8 -4CI4 7.8 PPARA_HUMAN
96 Blastp_CBE 70.5766% -89 - C8 -3FEI 8.0 PPARA_HUMAN
90 Blastp_CBE 70.4965% -81 - C8 -1KKQ 9.9 PPARA_HUMAN
92 Blastp_CBE 70.1965% -78 - C8 -1KKQ 9.0 PPARA_HUMAN
107 HHSearch 68.8676%-202 - C8 -5U3Q 8.8 PPARD_HUMAN
108 HHSearch 67.6976%-197 - C8 -3GWX 5.2 PPARD_HUMAN
113 HHSearch 66.4175%-187 - C8 -3VI8 6.0 PPARA_HUMAN
110 HHSearch 65.3964%-198 - C8 -6FZG 9.6 ?
106 HHSearch 64.7665%-193 - C8 -3B1M 6.5 PPARG_HUMAN
109 HHSearch 63.6765%-180 - C8 -2ATH 7.8 PPARG_HUMAN
112 HHSearch 63.4276%-195 - C8 -1KKQ 6.9 PPARA_HUMAN