@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : X_NR3C1_GCR: (2019-06-04 )
MDPKDLLKPSSGSPAVRGSPHYNDKPGNVIEFFGNYRGGVSVSVSASCPTSTASQSNTRQQQHFQKQLTATGDSTNGLNNNVPQPDLSKAVSLSMGLYMGESDTKVMSSDIAFPSQEQIGISTGETDFSLLEESIANLQAKSLAPDKLIEISEDPGGFKCDISAQPRPSMGQGGSNGSSSTNLFPKDQCTFDLLRDLGISPDSPLDGKSNPWLDPLFDEQEAFNLLSPLGTGDPFFMKSEVLSEGSKTLSLEDGTQRLGDHAKDMLLPSADRPISQVKTEKEDYIELCTPGVVNEEKFGPVYCVGNFSGSGLFGNKSSAISVHGVSTSGGQMYHYDLNTATISQQDVKPVFNLGSPGTSIAEGWNRCHGSGNDTAASPGNVNFPNRSVFSNGYSSPGIRSDASPSPSTSSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQSTTATARESPETSMTRTLVPASVAQLTPTLISLLEVIEPEVLYSGYDSSIPDTTRRLMSSLNMLGGRQVVSAVRWAKAIPGFRNLHLDDQMTLLQYSWMFLMVFALGWRSYKQTNGSILYFAPDLVITEDRMHLPFMQERCQEMLKIAGEMSSLQISYDEYLCMKVLLLMCTIPKEGLKSHALFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVAENLLAFCFLSFLDKSMSIEFPDMLSEIISNQIPKYSSGNLKKLLFHQK

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEX_A_4(3MNP)

[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




CV7_A_7(4UDD)

[Raw transfer]




1TA_A_5(5UFS)
?
[Raw transfer]




DAY_A_3(3BQD)

[Raw transfer]




1TA_B_6(5UFS)
?
[Raw transfer]




1TA_A_5(5UFS)
?
[Raw transfer]




DEX_A_4(3MNO)

[Raw transfer]




DEX_B_6(3GN8)
?
[Raw transfer]




8W5_A_6(5NFP)

[Raw transfer]




DEX_A_4(4UDC)

[Raw transfer]




DEX_I_9(1M2Z)

[Raw transfer]




DEX_H_8(1M2Z)
GCR_HUMAN
[Raw transfer]




DEX_A_4(3MNE)

[Raw transfer]




NN7_A_4(4CSJ)

[Raw transfer]




MOF_A_3(4P6W)

[Raw transfer]




C0R_C_3(2A3I)

[Raw transfer]




B9W_A_4(6EL9)

[Raw transfer]




DEX_L_12(1P93)

[Raw transfer]




GW6_B_6(3CLD)

[Raw transfer]




JZN_A_7(3K23)
GCR_HUMAN
[Raw transfer]




DEX_J_10(1P93)
GCR_HUMAN
[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




DEX_K_11(1P93)
GCR_HUMAN
[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




486_B_8(3H52)
GCR_HUMAN
[Raw transfer]




MOF_B_7(4E2J)
?
[Raw transfer]




LSJ_A_3(4LSJ)

[Raw transfer]




DEX_I_9(1P93)
GCR_HUMAN
[Raw transfer]




GW6_A_5(3CLD)
GCR_HUMAN
[Raw transfer]




B9Q_A_4(6EL6)

[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




JZN_B_8(3K23)
GCR_HUMAN
[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




R8C_A_4(5G5W)

[Raw transfer]




1CA_B_7(3RY9)
?
[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




486_B_13(5UC3)

[Raw transfer]




STR_B_9(4FN9)
?
[Raw transfer]




8W8_A_6(5NFT)

[Raw transfer]




486_A_3(5UC3)
GCR_HUMAN
[Raw transfer]




JZS_A_5(3K22)
GCR_HUMAN
[Raw transfer]




486_B_2(1NHZ)

[Raw transfer]




866_B_7(3E7C)

[Raw transfer]




HJ4_B_4(6DXK)

[Raw transfer]




E7T_A_5(5G3J)

[Raw transfer]




29M_A_5(4MDD)
GCR_HUMAN
[Raw transfer]




HJ4_A_3(6DXK)
GCR_HUMAN
[Raw transfer]




STR_A_2(4LTW)
?
[Raw transfer]




486_A_7(3H52)
GCR_HUMAN
[Raw transfer]




HFN_A_2(4PF3)

[Raw transfer]




STR_A_2(4LTW)
?
[Raw transfer]




JZN_C_9(3K23)

[Raw transfer]




B9T_A_4(6EL7)

[Raw transfer]




866_A_5(3E7C)
GCR_HUMAN
[Raw transfer]




DHT_B_19(5JJM)
?
[Raw transfer]




486_D_11(3H52)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




198_C_3(1Z95)

[Raw transfer]




97A_A_5(5V8Q)

[Raw transfer]




486_C_10(3H52)
GCR_HUMAN
[Raw transfer]




CPS_B_13(5UC1)
?
[Raw transfer]




CPS_A_5(5UC1)
?
[Raw transfer]




EDO_A_3(5G5W)

[Raw transfer]




EDO_A_3(4CSJ)

[Raw transfer]




16 PsiBlast_PDB 88.3376%-172 - C10 -3MNP 7.3
134 HHSearch 87.2077%-172 - C10 -3MNP 7.3
38 Blastp_CBE 87.1977%-174 - C10 -4P6W 9.2
14 PsiBlast_PDB 86.4676%-176 - C10 -3MNO 7.7
19 PsiBlast_PDB 85.7675%-165 - C10 -3K22 7.0 GCR_HUMAN
48 Blastp_CBE 85.6477%-159 - C10 -5UFS 8.4 ?
35 Blastp_CBE 85.6376%-167 - C10 -1M2Z 8.1 GCR_HUMAN
34 Blastp_CBE 85.5076%-165 - C10 -1M2Z 8.2
20 PsiBlast_PDB 85.4476%-168 - C10 -3MNE 8.4
47 Blastp_CBE 85.3477%-158 - C10 -5UFS 8.3 ?
39 Blastp_CBE 85.2176%-163 - C10 -3BQD 10.4
31 Blastp_CBE 84.8476%-166 - C10 -3K23 11.5 GCR_HUMAN
29 Blastp_CBE 84.8176%-170 - C10 -3E7C 6.1
45 Blastp_CBE 84.7177%-157 - C10 -4E2J 7.8 ?
136 HHSearch 84.0077%-162 - C10 -5UFS 8.4 ?
15 PsiBlast_PDB 84.0075%-171 - C10 -3E7C 7.0 GCR_HUMAN
46 Blastp_CBE 83.7877%-159 - C10 -4E2J 7.0 ?
3 PsiBlast_PDB 83.7673%-166 - C10 -4UDC 8.7
41 Blastp_CBE 83.7377%-157 - C10 -3GN8 8.5 ?
40 Blastp_CBE 83.6977%-155 - C10 -3GN8 8.6 ?
21 Blastp_CBE 83.3673%-167 - C10 -1P93 7.7
33 Blastp_CBE 83.2675%-176 - C10 -4LSJ 9.1
9 PsiBlast_PDB 83.2672%-157 - C10 -6EL6 9.8
6 PsiBlast_PDB 83.2372%-159 - C10 -5G3J 9.4
5 PsiBlast_PDB 83.1172%-163 - C10 -4UDD 9.9
7 PsiBlast_PDB 82.8272%-158 - C10 -5G5W 10.1
2 PsiBlast_PDB 82.6973%-160 - C10 -1P93 7.8 GCR_HUMAN
4 PsiBlast_PDB 82.6872%-160 - C10 -4CSJ 10.5
17 PsiBlast_PDB 82.5475%-167 - C10 -3CLD 9.1 GCR_HUMAN
8 PsiBlast_PDB 82.5072%-163 - C10 -5NFP 9.3
32 Blastp_CBE 82.3676%-170 - C10 -3CLD 9.1
22 Blastp_CBE 82.2573%-165 - C10 -1P93 7.6 GCR_HUMAN
11 PsiBlast_PDB 82.2472%-155 - C10 -6EL7 9.0
12 PsiBlast_PDB 82.1372%-158 - C10 -6EL9 10.3
10 PsiBlast_PDB 82.0072%-155 - C10 -5NFT 10.3
30 Blastp_CBE 81.9976%-159 - C10 -3K23 11.1
51 Blastp_CBE 81.9176%-157 - C10 -3H52 9.4 GCR_HUMAN
18 PsiBlast_PDB 81.8375%-153 - C10 -3K23 9.1 GCR_HUMAN
53 Blastp_CBE 81.1070%-140 - C10 -3RY9 8.5 ?
23 Blastp_CBE 81.0373%-159 - C10 -1P93 7.7 GCR_HUMAN
42 Blastp_CBE 80.8074%-147 - C10 -6DXK 10.8
43 Blastp_CBE 80.7974%-145 - C10 -6DXK 10.7 GCR_HUMAN
54 Blastp_CBE 80.2670%-136 - C10 -3RY9 8.8 ?
49 Blastp_CBE 79.4776%-178 - C10 -3H52 5.0
44 Blastp_CBE 79.4574%-161 - C10 -4MDD 10.3 GCR_HUMAN
37 Blastp_CBE 78.9676%-164 - C10 -5UC3 10.4 GCR_HUMAN
52 Blastp_CBE 78.9576%-151 - C10 -3H52 8.6 GCR_HUMAN
61 Blastp_CBE 78.6163%-135 - C10 -4LTW 8.0 ?
60 Blastp_CBE 78.1963%-133 - C10 -4FN9 7.5 ?
36 Blastp_CBE 78.0076%-167 - C10 -5UC3 10.4
59 Blastp_CBE 77.7963%-140 - C10 -4FN9 7.2 ?
142 HHSearch 77.6363%-138 - C10 -4LTW 8.0 ?
50 Blastp_CBE 77.5476%-174 - C10 -3H52 5.0 GCR_HUMAN
1 PsiBlast_PDB 77.4373%-157 - C10 -1NHZ 9.7
58 Blastp_CBE 76.8565%-147 - C10 -2Q1H 8.3 ?
131 HHSearch 76.7158%-131 - C10 -4PF3 6.6
138 HHSearch 76.4965%-145 - C10 -2Q1H 8.3 ?
140 HHSearch 75.2558%-144 - C10 -3VHV 8.8
143 HHSearch 73.2051%-141 - C10 -5JJM 7.2 ?
144 HHSearch 72.8751%-139 - C10 -5V8Q 6.7
137 HHSearch 72.7059%-130 - C10 -2A3I 5.4
141 HHSearch 71.6554%-138 - C10 -1SQN 6.6 PRGR_HUMAN
55 Blastp_CBE 71.4976%-170 - C10 -5UC1 4.3 ?
145 HHSearch 71.2851%-149 - C10 -1Z95 7.7
56 Blastp_CBE 70.2976%-162 - C10 -5UC1 4.7 ?