@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Z_NR2B3_RXRGB: (2019-06-05 )
MDTHDTYLHLHSSPLNSSPSQPPVMSSMVGHPSVISSSRPLPSPMSTLGSSMNGLPSPYSVITPSLSSPSISLPSTPSMGFNTLNSPQMNSLSMNGNEDIKPPPGLAPLGNMSSYQCTSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKSDTEVETTSRFNEDMPVDKILDAELSVEPKTETYTESSPSNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT

Atome Classification :

(96 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_D_6(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
?
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_A_6(5ZQU)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




4 PsiBlast_PDB 85.0882%-138 - C7 -5UAN 7.1 RXRA_HUMAN
2 PsiBlast_PDB 83.3574%-126 - C7 -3E00 7.8 RXRA_HUMAN
1 PsiBlast_PDB 82.3174%-126 - C7 -3DZU 7.2 RXRA_HUMAN
11 PsiBlast_PDB 76.4787%-127 - C7 -1MZN 9.8 RXRA_HUMAN
34 Blastp_CBE 76.3487%-127 - C7 -1MZN 9.8 RXRA_HUMAN
80 Blastp_CBE 75.7788% -57 - C7 -1XVP 5.8 RXRA_HUMAN
49 Blastp_CBE 74.6588%-130 - C7 -1XDK 7.6 RXRA_MOUSE
82 Blastp_CBE 74.4688% -54 - C7 -1XV9 5.5 RXRA_HUMAN
56 Blastp_CBE 74.3088%-139 - C7 -3OZJ 2.7 RXRA_HUMAN
97 Blastp_CBE 74.0288%-132 - C7 -4POJ 8.9 RXRA_HUMAN
92 Blastp_CBE 74.0288%-124 - C7 -5Z12 7.3 RXRA_HUMAN
17 PsiBlast_PDB 73.9387%-128 - C7 -2ZY0 9.1 RXRA_HUMAN
32 Blastp_CBE 73.9187%-129 - C7 -2ZY0 9.0 RXRA_HUMAN
96 Blastp_CBE 73.9088%-128 - C7 -4PP3 8.8 RXRA_HUMAN
48 Blastp_CBE 73.8588%-130 - C7 -1XDK 7.7 RXRA_MOUSE
65 Blastp_CBE 73.8188% -43 - C7 -1FM9 8.6 RXRA_HUMAN
102 Blastp_CBE 73.7388%-131 - C7 -4K4J 8.2 ?
112 Blastp_CBE 73.6683%-142 - C7 -1UHL 5.3
107 Blastp_CBE 73.6688%-133 - C7 -5MMW 7.7
62 Blastp_CBE 73.6488% -45 - C7 -1K74 7.9 RXRA_HUMAN
52 Blastp_CBE 73.6088%-127 - C7 -3UVV 7.9 RXRA_HUMAN
22 Blastp_CBE 73.6087%-130 - C7 -5LYQ 10.6 RXRA_HUMAN
57 Blastp_CBE 73.5088%-129 - C7 -3OZJ 4.1 RXRA_HUMAN
35 Blastp_CBE 73.4987%-130 - C7 -1MZN 9.8 RXRA_HUMAN
85 Blastp_CBE 73.4888%-128 - C7 -4RME 9.4 RXRA_HUMAN
14 PsiBlast_PDB 73.4487%-135 - C7 -2P1V 10.2 RXRA_HUMAN
99 Blastp_CBE 73.4088%-129 - C7 -4M8H 8.3 RXRA_HUMAN
83 Blastp_CBE 73.3988% -44 - C7 -1XV9 6.0 RXRA_HUMAN
24 Blastp_CBE 73.3887%-140 - C7 -3R5M 6.6 RXRA_HUMAN
146 HHSearch 73.3488%-129 - C7 -4ZSH 8.0 RXRA_HUMAN
110 Blastp_CBE 73.2988%-135 - C7 -5MJ5 9.6 RXRA_HUMAN
98 Blastp_CBE 73.2688%-133 - C7 -4POH 8.1 RXRA_HUMAN
86 Blastp_CBE 73.2388%-128 - C7 -4RMD 9.8 RXRA_HUMAN
33 Blastp_CBE 73.2387%-128 - C7 -1MZN 9.9 RXRA_HUMAN
25 Blastp_CBE 73.2087%-128 - C7 -3R5M 7.2 RXRA_HUMAN
81 Blastp_CBE 73.1888% -42 - C7 -1XVP 5.4 RXRA_HUMAN
23 Blastp_CBE 73.1887%-129 - C7 -4ZSH 8.0 RXRA_HUMAN
9 PsiBlast_PDB 73.1887%-129 - C7 -1MV9 8.8 RXRA_HUMAN
105 Blastp_CBE 73.0788%-139 - C7 -5MKJ 8.3 RXRA_HUMAN
103 Blastp_CBE 73.0788%-127 - C7 -3OAP 7.7 RXRA_HUMAN
15 PsiBlast_PDB 73.0787%-135 - C7 -3FUG 9.7 RXRA_HUMAN
94 Blastp_CBE 73.0588%-133 - C7 -4RFW 8.0 RXRA_HUMAN
10 PsiBlast_PDB 73.0587%-130 - C7 -1MVC 10.2 RXRA_HUMAN
6 PsiBlast_PDB 73.0487%-132 - C7 -4OC7 7.5 RXRA_HUMAN
84 Blastp_CBE 72.9887%-118 - C7 -5JI0 7.2 RXRA_HUMAN
100 Blastp_CBE 72.9788%-133 - C7 -4M8E 8.4 RXRA_HUMAN
101 Blastp_CBE 72.9688%-128 - C7 -4K6I 9.4 ?
13 PsiBlast_PDB 72.9687%-143 - C7 -2P1U 10.0 RXRA_HUMAN
67 Blastp_CBE 72.9388% -53 - C7 -1FM6 8.1 RXRA_HUMAN
47 Blastp_CBE 72.8987%-136 - C7 -3E94 5.8 RXRA_HUMAN
54 Blastp_CBE 72.8688%-125 - C7 -6A5Z 8.5 ?
108 Blastp_CBE 72.8288%-127 - C7 -5MK4 9.4 ?
106 Blastp_CBE 72.8188%-140 - C7 -3PCU 4.8 RXRA_HUMAN
12 PsiBlast_PDB 72.8087%-139 - C7 -2P1T 9.5 RXRA_HUMAN
95 Blastp_CBE 72.6788%-128 - C7 -4PP5 8.8 RXRA_HUMAN
16 PsiBlast_PDB 72.6587%-138 - C7 -2ZXZ 9.3 RXRA_HUMAN
114 Blastp_CBE 72.6480%-113 - C7 -1XIU 7.8 RXR_BIOGL
69 Blastp_CBE 72.5988%-134 - C7 -1RDT 9.8 RXRA_HUMAN
109 Blastp_CBE 72.5588%-129 - C7 -5MK4 9.3 RXRA_HUMAN
93 Blastp_CBE 72.3988%-124 - C7 -4RMC 8.2 RXRA_HUMAN
53 Blastp_CBE 72.3888%-137 - C7 -6A5Z 8.9 ?
104 Blastp_CBE 72.2288%-134 - C7 -1DKF 7.2 RXRA_MOUSE
91 Blastp_CBE 72.0588%-137 - C7 -5Z12 7.9 RXRA_HUMAN
66 Blastp_CBE 72.0488% -50 - C7 -1FM6 8.4 RXRA_HUMAN
113 Blastp_CBE 71.9585%-138 - C7 -5EC9 10.3 ?
46 Blastp_CBE 71.9287%-139 - C7 -3KWY 7.5 RXRA_HUMAN
55 Blastp_CBE 71.5188%-134 - C7 -6A5Y 8.7 ?
51 Blastp_CBE 70.8887%-115 - C7 -1FBY 8.0 RXRA_HUMAN
50 Blastp_CBE 70.8287%-119 - C7 -1FBY 7.9 RXRA_HUMAN
115 Blastp_CBE 70.3280%-122 - C7 -1XIU 8.0 RXR_BIOGL
63 Blastp_CBE 69.7688% -52 - C7 -1G5Y 6.3 RXRA_HUMAN
144 HHSearch 69.5688%-117 - C7 -3H0A 8.2
44 Blastp_CBE 69.3387%-142 - C7 -4N5G Error ?
111 Blastp_CBE 69.0788%-109 - C7 -3H0A 8.2
8 PsiBlast_PDB 69.0487%-111 - C7 -3A9E 9.2 RXRA_MOUSE
120 Blastp_CBE 68.8783%-154 - C7 -1H9U 9.8 RXRB_HUMAN
64 Blastp_CBE 68.8288% -48 - C7 -1G5Y 6.6 RXRA_HUMAN
156 HHSearch 68.7592%-154 - C7 -5EC9 10.2 ?
118 Blastp_CBE 68.4583%-150 - C7 -1H9U 9.0 RXRB_HUMAN
119 Blastp_CBE 68.0083%-150 - C7 -1H9U 9.8 RXRB_HUMAN
117 Blastp_CBE 67.9983%-148 - C7 -1H9U 9.1
150 HHSearch 67.9885%-134 - C7 -1XIU 7.9 RXR_BIOGL
41 Blastp_CBE 67.8387%-154 - C7 -4N8R Error ?
40 Blastp_CBE 67.7787%-158 - C7 -4N8R Error ?
29 Blastp_CBE 67.6187%-115 - C7 -3R2A 3.7 RXRA_HUMAN
68 Blastp_CBE 67.3388%-118 - C7 -3FC6 7.6 RXRA_HUMAN
39 Blastp_CBE 66.8087%-159 - C7 -4N8R 8.0 ?
72 Blastp_CBE 66.4887%-145 - C7 -5ZQU 3.5 ?
71 Blastp_CBE 66.2487%-150 - C7 -5ZQU 7.7 ?
73 Blastp_CBE 66.0987%-154 - C7 -5ZQU 3.9 ?
27 Blastp_CBE 66.0487%-124 - C7 -3R2A 3.8 RXRA_HUMAN
45 Blastp_CBE 66.0287%-158 - C7 -4N5G 8.4 RXRA_HUMAN
43 Blastp_CBE 65.9587%-154 - C7 -4N5G 8.1 ?
42 Blastp_CBE 65.5487%-149 - C7 -4N8R 8.1 RXRA_HUMAN
70 Blastp_CBE 65.1887%-155 - C7 -5ZQU 4.1 ?
121 Blastp_CBE 64.5974%-154 - C7 -4OZT 3.1 ?