@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Z_NR3C3_PRGR: (2019-06-05 )
MLGGRKMKRFAGLKVMGLSPSLMFQSPLSLLTDGQTLSSLPCMSAMRELQLSPQMISILENIEPQVVYSGYDNTQPEVPHLLLNSLNRLCERQLLWIVRWSKSLPGFRNLHINDQMTLIQYSWMGLMLFSLGWRTFQNVTPDYLYFAPDLVLSNDQLRRSPIYDLCLAMQFVPQEFANLQVTKEEFLCMKALMLLNTVPLEGLKSQTQFDEMRQNYICELSKAIQLKEKGVVASSQRFYHLTKLMDNMHEIVKKVNLYCLSTFIQADAMKVEFPEMMTEVIASQLPKVLAGMVKPLMFHHK

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A2K_B_5(4APU)

[Raw transfer]




486_A_3(2W8Y)
PRGR_HUMAN
[Raw transfer]




AS0_A_3(4A2J)
PRGR_HUMAN
[Raw transfer]




2S0_A_3(4OAR)

[Raw transfer]




NDR_D_4(1SQN)

[Raw transfer]




AS0_B_5(4A2J)

[Raw transfer]




R18_A_3(1E3K)
PRGR_HUMAN
[Raw transfer]




WOW_B_5(3KBA)

[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




STR_B_4(1A28)

[Raw transfer]




NOG_B_4(3D90)

[Raw transfer]




GOL_B_14(3ZR7)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




T98_E_5(1ZUC)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




NOG_A_3(3D90)
PRGR_HUMAN
[Raw transfer]




AS0_C_3(2OVM)

[Raw transfer]




R18_B_4(1E3K)

[Raw transfer]




WOW_A_3(3KBA)
PRGR_HUMAN
[Raw transfer]




AS0_A_3(2OVH)

[Raw transfer]




NDR_B_5(2W8Y)

[Raw transfer]




T98_D_4(1ZUC)
PRGR_HUMAN
[Raw transfer]




GKK_B_9(3HQ5)

[Raw transfer]




ORC_B_8(3ZRB)

[Raw transfer]




OR8_A_3(4APU)
PRGR_HUMAN
[Raw transfer]




GKK_A_7(3HQ5)
PRGR_HUMAN
[Raw transfer]




MOF_B_5(1SR7)

[Raw transfer]




MOF_A_4(1SR7)
PRGR_HUMAN
[Raw transfer]




ORB_A_3(3ZRA)
PRGR_HUMAN
[Raw transfer]




OR8_A_3(3ZR7)
PRGR_HUMAN
[Raw transfer]




OR8_B_10(3ZR7)

[Raw transfer]




30X_B_4(3G8O)

[Raw transfer]




30X_A_3(3G8O)
PRGR_HUMAN
[Raw transfer]




HFN_A_2(4PF3)

[Raw transfer]




OR8_A_3(3ZRB)
PRGR_HUMAN
[Raw transfer]




97A_A_5(5V8Q)

[Raw transfer]




ORB_B_5(3ZRA)

[Raw transfer]




486_A_3(4LTW)
?
[Raw transfer]




486_A_3(4LTW)
?
[Raw transfer]




CPS_B_11(4FN9)
?
[Raw transfer]




CPS_B_11(4FN9)
?
[Raw transfer]




21 Blastp_CBE 96.5965%-157 - C7 -3HQ5 7.9
31 Blastp_CBE 96.5265%-156 - C7 -3G8O 6.4
3 PsiBlast_PDB 95.7865%-156 - C7 -3ZR7 7.7 PRGR_HUMAN
12 PsiBlast_PDB 95.6564%-158 - C7 -1E3K 7.2 PRGR_HUMAN
35 Blastp_CBE 95.5966%-156 - C7 -3KBA 7.1
15 PsiBlast_PDB 95.4764%-156 - C7 -1ZUC 7.8
22 Blastp_CBE 95.4665%-151 - C7 -1A28 8.3
6 PsiBlast_PDB 95.3165%-155 - C7 -4A2J 4.6 PRGR_HUMAN
33 Blastp_CBE 95.2765%-157 - C7 -1SR7 7.5
43 HHSearch 95.2561%-150 - C7 -4LTW 5.8 ?
19 PsiBlast_PDB 95.1860%-150 - C7 -4LTW 5.8 ?
2 PsiBlast_PDB 95.1865%-153 - C7 -2W8Y 5.5 PRGR_HUMAN
11 PsiBlast_PDB 95.0765%-160 - C7 -3HQ5 8.3 PRGR_HUMAN
34 Blastp_CBE 94.7365%-152 - C7 -1SQN 6.7
7 PsiBlast_PDB 94.5465%-151 - C7 -4APU 6.5 PRGR_HUMAN
5 PsiBlast_PDB 94.5365%-148 - C7 -3ZRB 7.5 PRGR_HUMAN
29 Blastp_CBE 94.4965%-151 - C7 -3D90 7.3
4 PsiBlast_PDB 94.4465%-154 - C7 -3ZRA 7.1 PRGR_HUMAN
32 Blastp_CBE 94.3165%-149 - C7 -1ZUC 6.5 PRGR_HUMAN
30 Blastp_CBE 94.1865%-156 - C7 -1E3K 7.5
25 Blastp_CBE 94.1765%-155 - C7 -3ZRB 6.1
23 Blastp_CBE 94.1565%-153 - C7 -4APU 11.3
40 HHSearch 94.1165%-154 - C7 -1SQN 7.3 PRGR_HUMAN
13 PsiBlast_PDB 93.8464%-148 - C7 -3D90 7.4 PRGR_HUMAN
17 PsiBlast_PDB 93.7964%-154 - C7 -1SQN 7.3 PRGR_HUMAN
26 Blastp_CBE 93.4965%-149 - C7 -3ZRA 6.9
1 PsiBlast_PDB 93.2664%-152 - C7 -3G8O 6.9 PRGR_HUMAN
36 Blastp_CBE 93.2361%-146 - C7 -4FN9 3.5 ?
14 PsiBlast_PDB 93.2264%-153 - C7 -1SR7 10.1 PRGR_HUMAN
28 Blastp_CBE 93.1465%-150 - C7 -2W8Y 7.4
24 Blastp_CBE 92.9765%-154 - C7 -4A2J 4.3
20 PsiBlast_PDB 92.5960%-143 - C7 -4FN9 3.4 ?
27 Blastp_CBE 92.5765%-152 - C7 -3ZR7 7.8
18 PsiBlast_PDB 92.2065%-165 - C7 -3KBA 7.7 PRGR_HUMAN
9 PsiBlast_PDB 90.7565%-148 - C7 -2OVH 5.0
41 HHSearch 90.4948%-163 - C7 -3MNP 5.1
16 PsiBlast_PDB 89.4265%-142 - C7 -4OAR 5.3
42 HHSearch 89.3950%-152 - C7 -5V8Q 4.6
10 PsiBlast_PDB 89.1865%-148 - C7 -2OVM 4.6
38 HHSearch 87.2349%-136 - C7 -4PF3 7.4