@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AMHR2_HUMAN: (2020-09-04 )
MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITASRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZZG_A_2(2WOT)
TGFR1_HUMAN
[Raw transfer]




IYZ_A_4(4DYM)
ACVR1_HUMAN
[Raw transfer]




M2Z_B_14(6SZM)
?
[Raw transfer]




STU_A_2(5E8W)
TGFR1_HUMAN
[Raw transfer]




GOL_A_6(4DYM)
ACVR1_HUMAN
[Raw transfer]




JZO_E_20(3KCF)
TGFR1_HUMAN
[Raw transfer]




3WN_A_2(4X2J)
TGFR1_HUMAN
[Raw transfer]




STU_A_2(5E8X)
TGFR1_HUMAN
[Raw transfer]




STU_A_2(5E8X)
TGFR1_HUMAN
[Raw transfer]




55F_D_9(3FAA)
TGFR1_HUMAN
[Raw transfer]




A3F_A_2(6EIX)
ACVR1_HUMAN
[Raw transfer]




580_B_2(1RW8)
TGFR1_HUMAN
[Raw transfer]




J2V_A_2(5QIL)
TGFR1_HUMAN
[Raw transfer]




J2Y_A_2(5QIM)
TGFR1_HUMAN
[Raw transfer]




8LY_A_2(5USQ)
TGFR1_HUMAN
[Raw transfer]




D0A_A_2(6B8Y)
TGFR1_HUMAN
[Raw transfer]




3WN_A_2(4X2J)
TGFR1_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




5L4_A_2(5E8Z)
TGFR1_HUMAN
[Raw transfer]




3WO_A_2(4X2K)
TGFR1_HUMAN
[Raw transfer]




8LY_A_2(5USQ)
TGFR1_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




3WJ_A_2(4X2F)
TGFR1_HUMAN
[Raw transfer]




085_A_2(3TZM)
TGFR1_HUMAN
[Raw transfer]




ADP_B_9(3G2F)
BMPR2_HUMAN
[Raw transfer]




6OJ_B_8(4ASX)
AVR2A_HUMAN
[Raw transfer]




6OJ_A_3(4ASX)
AVR2A_HUMAN
[Raw transfer]




6OJ_A_3(4ASX)
AVR2A_HUMAN
[Raw transfer]




3WK_A_2(4X2G)
TGFR1_HUMAN
[Raw transfer]




ZUQ_A_4(5FRI)
TGFR1_HUMAN
[Raw transfer]




ADP_A_3(3G2F)
BMPR2_HUMAN
[Raw transfer]




ADP_A_3(3G2F)
BMPR2_HUMAN
[Raw transfer]




3WA_A_2(4X0M)
TGFR1_HUMAN
[Raw transfer]




TRS_A_4(4X2G)
TGFR1_HUMAN
[Raw transfer]




EDO_A_11(6EIX)
ACVR1_HUMAN
[Raw transfer]




EDO_A_16(3OOM)
ACVR1_HUMAN
[Raw transfer]




DMS_B_16(6SZM)
?
[Raw transfer]




143 HHSearch 96.3142%-106 - C1 -3G2F 3.8 BMPR2_HUMAN
27 Blastp_CBE 86.0734% -87 - C1 -4X2J 4.8 TGFR1_HUMAN
26 Blastp_CBE 86.0734% -87 - C1 -4X2K 4.8 TGFR1_HUMAN
20 PsiBlast_PDB 85.5433% -88 - C1 -4X2G 4.0 TGFR1_HUMAN
28 Blastp_CBE 85.3134% -87 - C1 -4X2F 4.8 TGFR1_HUMAN
144 HHSearch 85.2133%-111 - C1 -5E8X 1.8 TGFR1_HUMAN
29 Blastp_CBE 85.1434% -87 - C1 -4X0M 3.7 TGFR1_HUMAN
37 Blastp_CBE 84.9734% -89 - C1 -5USQ 6.3 TGFR1_HUMAN
58 Blastp_CBE 84.7932% -91 - C1 -5E8X 1.8 TGFR1_HUMAN
33 Blastp_CBE 84.7434% -84 - C1 -5QIM 6.0 TGFR1_HUMAN
145 HHSearch 84.7334%-107 - C1 -4X2J 4.8 TGFR1_HUMAN
9 PsiBlast_PDB 84.6933% -87 - C1 -6B8Y 6.9 TGFR1_HUMAN
11 PsiBlast_PDB 84.6633% -83 - C1 -5QIL 5.7 TGFR1_HUMAN
36 Blastp_CBE 84.4134% -87 - C1 -5FRI 5.7 TGFR1_HUMAN
35 Blastp_CBE 84.3534% -83 - C1 -2WOT 7.8 TGFR1_HUMAN
7 PsiBlast_PDB 84.3533% -85 - C1 -5E8W 2.0 TGFR1_HUMAN
146 HHSearch 84.1035%-109 - C1 -5USQ 6.3 TGFR1_HUMAN
8 PsiBlast_PDB 83.7633% -83 - C1 -5E8Z 7.0 TGFR1_HUMAN
38 Blastp_CBE 83.7234% -84 - C1 -3KCF 4.3 TGFR1_HUMAN
43 Blastp_CBE 83.7134% -89 - C1 -3FAA 4.8 TGFR1_HUMAN
18 PsiBlast_PDB 82.5233% -88 - C1 -3TZM 6.3 TGFR1_HUMAN
17 PsiBlast_PDB 81.5733% -82 - C1 -1RW8 5.0 TGFR1_HUMAN
1 PsiBlast_PDB 81.5042% -29 - C1 -3G2F 3.8 BMPR2_HUMAN
21 Blastp_CBE 78.1842% -16 - C1 -3G2F 5.6 BMPR2_HUMAN
156 HHSearch 73.3034% -51 - C1 -4ASX 3.3 AVR2A_HUMAN
157 HHSearch 71.5934% -48 - C1 -3SOC 5.8 AVR2A_HUMAN
60 Blastp_CBE 71.5935% -39 - C1 -6EIX 6.0 ACVR1_HUMAN
97 Blastp_CBE 71.5634% -35 - C1 -4DYM 5.9 ACVR1_HUMAN
68 Blastp_CBE 70.3934% -33 - C1 -6SZM 7.2 ?
92 Blastp_CBE 69.4534% -36 - C1 -3OOM 2.8 ACVR1_HUMAN
22 Blastp_CBE 64.8334% 13 - C1 -4ASX 4.6 AVR2A_HUMAN
5 PsiBlast_PDB 64.5034% 13 - C1 -4ASX 3.3 AVR2A_HUMAN
4 PsiBlast_PDB 63.9034% 15 - C1 -3SOC 5.8 AVR2A_HUMAN