@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CDC7_HUMAN: (2020-09-05 )
MEASLGIQMDEPMAFSPQRDRFQAEGSLKKNEQNFKLAGVKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKSHIITGNKIPLSGPVPKELDQQSTTKASVKRPYTNAQIQIKQGKDGKEGSVGLSVQRSVFGERNFNIHSSISHESPAVKLMKQSKTVDVLSRKLATKKKAISTKVMNSAVMRKTASSCPASLTCDCYATDKVCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHASHQPAISEKTDHKASCLVQTPPGQYSGNSFKKGDSNSCEHCFDEYNTNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_8(4F9A)
CDC7_HUMAN
[Raw transfer]




ADP_A_5(4F9A)
CDC7_HUMAN
[Raw transfer]




ADP_A_3(4F99)
CDC7_HUMAN
[Raw transfer]




ADP_A_11(4NM3)
GSK3B_HUMAN
[Raw transfer]




0SY_C_7(4F9B)
CDC7_HUMAN
[Raw transfer]




0SY_A_5(4F9B)
CDC7_HUMAN
[Raw transfer]




0SY_A_5(4F9B)
CDC7_HUMAN
[Raw transfer]




ATP_C_18(5XVU)
?
[Raw transfer]




0SY_C_7(4F9B)
CDC7_HUMAN
[Raw transfer]




AMP_A_3(6O6Q)
?
[Raw transfer]




0SX_A_3(4F9C)
CDC7_HUMAN
[Raw transfer]




0SX_A_3(4F9C)
CDC7_HUMAN
[Raw transfer]




9YE_B_10(5ONI)
CSK21_HUMAN
[Raw transfer]




9YE_A_2(5OMY)
CSK21_HUMAN
[Raw transfer]




TRS_A_2(6HMQ)
CSK22_HUMAN
[Raw transfer]




4B0_A_16(6HMQ)
CSK22_HUMAN
[Raw transfer]




22 Blastp_CBE 84.8899%-132 - C3 -4F9A 5.4 CDC7_HUMAN
2 PsiBlast_PDB 83.8198%-131 - C3 -4F9A 5.4 CDC7_HUMAN
21 Blastp_CBE 82.8299%-123 - C3 -4F9B 4.9 CDC7_HUMAN
1 PsiBlast_PDB 82.5198%-129 - C3 -4F99 5.5 CDC7_HUMAN
3 PsiBlast_PDB 82.1998%-120 - C3 -4F9B 5.1 CDC7_HUMAN
4 PsiBlast_PDB 82.0198%-123 - C3 -4F9C 6.6 CDC7_HUMAN
499 HHSearch 74.09100%-145 - C3 -4F9B 5.1 CDC7_HUMAN
498 HHSearch 73.47100%-142 - C3 -4F9C 6.6 CDC7_HUMAN
500 HHSearch 73.32100%-148 - C3 -4F9B 4.9 CDC7_HUMAN
522 Fugue 64.6321% -49 - C4 -2RIO - IRE1_YEAST -
526 Fugue 58.4422% 29 - C4 -4AW2 - MRCKA_RAT -
508 HHSearch 49.0529%-139 - C3 -6O6Q 4.1 ?
5 PsiBlast_PDB 45.6830% -36 - C3 -3SV0 - ? -
502 HHSearch 44.9228% -48 - C3 -5ONI 6.7 CSK21_HUMAN
511 HHSearch 44.8427% -51 - C3 -5XVU 5.3 ?
530 Fugue 43.6115% 14 - C2 -5CKW - ? -
505 HHSearch 43.6129% -93 - C3 -4NM3 3.4 GSK3B_HUMAN
503 HHSearch 43.2329% -43 - C3 -6HMQ 3.9 CSK22_HUMAN
531 Fugue 43.0820% -12 * C4 *1BYG - CSK_HUMAN -
501 HHSearch 42.9628% -41 - C3 -5OMY 5.2 CSK21_HUMAN