@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAPK2_HUMAN: (2019-05-17 )
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMHIPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVRRKNPVTGNYVKMSLQLYLVDNRSYLLDFKSIDDEVVEQRSGSSTPQRSCSAAGLHRPRSSFDSTTAESHSLSGSLTGSLTGSTLSSVSPRLGSHTMDFFEMCASLITTLAR

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STU_A_4(4QFG)
AAPK1_RAT
[Raw transfer]




STU_A_5(6C9H)
AAPK1_HUMAN
[Raw transfer]




STU_A_4(4QFS)
AAPK1_RAT
[Raw transfer]




STU_A_5(4CFH)
AAPK1_RAT
[Raw transfer]




STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]




STU_A_4(4QFR)
?
[Raw transfer]




STU_A_5(6C9F)
AAPK1_HUMAN
[Raw transfer]




STU_A_4(5KQ5)
?
[Raw transfer]




STU_A_5(6E4T)
?
[Raw transfer]




STU_A_4(6E4W)
?
[Raw transfer]




STU_A_5(6C9G)
AAPK1_HUMAN
[Raw transfer]




STU_A_4(6E4U)
AAPK1_RAT
[Raw transfer]




STU_A_4(4REW)
AAPK1_HUMAN
[Raw transfer]




STU_A_4(6B2E)
AAPK2_HUMAN
[Raw transfer]




EDJ_A_2(6BX6)
AAPK2_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




5 PsiBlast_PDB 91.9899%-132 - C3 -6B2E 7.4 AAPK2_HUMAN
8 PsiBlast_PDB 86.7974%-124 - C3 -4RER 9.1 AAPK1_HUMAN
17 PsiBlast_PDB 84.4871%-123 - C3 -6C9H 8.9 AAPK1_HUMAN
19 PsiBlast_PDB 80.6171%-134 - C3 -6C9G 9.3 AAPK1_HUMAN
18 PsiBlast_PDB 80.0971%-134 - C3 -6C9F 9.2 AAPK1_HUMAN
16 PsiBlast_PDB 78.3480%-129 - C3 -4CFH 8.5 AAPK1_RAT
14 PsiBlast_PDB 77.2473%-130 - C3 -6E4U 9.4 AAPK1_RAT
11 PsiBlast_PDB 77.0673%-134 - C3 -4QFS 9.7 AAPK1_RAT
10 PsiBlast_PDB 77.0673%-132 - C3 -4QFR 10.3 ?
15 PsiBlast_PDB 77.0573%-134 - C3 -6E4W 9.0 ?
13 PsiBlast_PDB 76.8173%-135 - C3 -6E4T 9.1 ?
9 PsiBlast_PDB 76.6973%-129 - C3 -4QFG 9.6 AAPK1_RAT
12 PsiBlast_PDB 76.6173%-131 - C3 -5KQ5 9.5 ?
7 PsiBlast_PDB 76.3574%-111 - C3 -4REW 8.9 AAPK1_HUMAN
26 Blastp_CBE 66.7199%-142 - C3 -3AQV 8.3 AAPK2_HUMAN
27 Blastp_CBE 63.1499%-147 - C3 -6BX6 6.6 AAPK2_HUMAN