@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CDK7_HUMAN: (2019-05-19 )
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF

Atome Classification :

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(1UA2)
CDK7_HUMAN
[Raw transfer]



ATP_H_8(1UA2)
CDK7_HUMAN
[Raw transfer]



ATP_G_7(1UA2)
CDK7_HUMAN
[Raw transfer]



ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]



ATP_F_6(1UA2)
CDK7_HUMAN
[Raw transfer]
24 HHSearch 93.27100%-115 - C1 -1UA2 6.2 CDK7_HUMAN
21 Blastp_CBE 92.8899%-115 - C1 -1UA2 6.2 CDK7_HUMAN
1 PsiBlast_PDB 92.8199%-114 - C1 -1UA2 6.2 CDK7_HUMAN
22 Blastp_CBE 92.4199%-113 - C1 -1UA2 6.4 CDK7_HUMAN
23 Blastp_CBE 91.0899%-112 - C1 -1UA2 5.4 CDK7_HUMAN