@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA1_HUMAN: (2019-05-20 )
MERRWPLGLGLVLLLCAPLPPGARAKEVTLMDTSKAQGELGWLLDPPKDGWSEQQQILNGTPLYMYQDCPMQGRRDTDHWLRSNWIYRGEEASRVHVELQFTVRDCKSFPGGAGPLGCKETFNLLYMESDQDVGIQLRRPLFQKVTTVAADQSFTIRDLVSGSVKLNVERCSLGRLTRRGLYLAFHNPGACVALVSVRVFYQRCPETLNGLAQFPDTLPGPAGLVEVAGTCLPHARASPRPSGAPRMHCSPDGEWLVPVGRCHCEPGYEEGGSGEACVACPSGSYRMDMDTPHCLTCPQQSTAESEGATICTCESGHYRAPGEGPQVACTGPPSAPRNLSFSASGTQLSLRWEPPADTGGRQDVRYSVRCSQCQGTAQDGGPCQPCGVGVHFSPGARGLTTPAVHVNGLEPYANYTFNVEAQNGVSGLGSSGHASTSVSISMGHAESLSGLSLRLVKKEPRQLELTWAGSRPRSPGANLTYELHVLNQDEERYQMVLEPRVLLTELQPDTTYIVRVRMLTPLGPGPFSPDHEFRTSPPVSRGLTGGEIVAVIFGLLLGAALLLGILVFRSRRAQRQRQQRQRDRATDVDREDKLWLKPYVDLQAYEDPAQGALDFTRELDPAWLMVDTVIGEGEFGEVYRGTLRLPSQDCKTVAIKTLKDTSPGGQWWNFLREATIMGQFSHPHILHLEGVVTKRKPIMIITEFMENGALDAFLREREDQLVPGQLVAMLQGIASGMNYLSNHNYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLSFGDKPYGEMSNQEVMKSIEDGYRLPPPVDCPAPLYELMKNCWAYDRARRPHFQKLQAHLEQLLANPHSLRTIANFDPRMTLRLPSLSGSDGIPYRTVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDLTQMGITLPGHQKRILCSIQGFKD

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

91K_A_2(5NKD)

[Raw transfer]




90T_A_2(5NKC)

[Raw transfer]




8ZZ_A_2(5NK2)

[Raw transfer]




8ZW_A_2(5NKI)

[Raw transfer]




90W_A_2(5NK6)

[Raw transfer]




1N1_A_2(5I9Y)

[Raw transfer]




90E_A_2(5NK4)

[Raw transfer]




92Q_A_2(5NK3)

[Raw transfer]




90B_A_2(5NKE)

[Raw transfer]




8ZT_A_2(5NKB)

[Raw transfer]




8ZH_A_2(5NJZ)

[Raw transfer]




90Z_A_2(5NK8)

[Raw transfer]




DWT_A_2(6FNG)

[Raw transfer]




8ZQ_A_2(5NKH)

[Raw transfer]




8ZN_A_2(5NKF)

[Raw transfer]




90N_A_2(5NK1)

[Raw transfer]




91H_A_2(5NKA)

[Raw transfer]




912_A_2(5NK9)

[Raw transfer]




8ZQ_A_2(5NKH)

[Raw transfer]




DXH_A_2(6FNF)

[Raw transfer]




DWT_A_2(6FNG)

[Raw transfer]




91E_A_2(5NK0)

[Raw transfer]




90K_A_2(5NK5)

[Raw transfer]




8ZZ_A_2(5NK7)

[Raw transfer]




8ZK_A_2(5NKG)

[Raw transfer]




GV0_A_2(5IA5)

[Raw transfer]




88Z_A_2(5IA4)

[Raw transfer]




627_A_2(5I9Z)

[Raw transfer]




A5B_A_4(5IA0)
EPHA2_HUMAN
[Raw transfer]




A5B_B_11(5IA0)
EPHA2_HUMAN
[Raw transfer]




AGS_A_2(5I9V)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




A5B_C_21(5IA0)

[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




DXK_C_21(6FNH)

[Raw transfer]




L66_A_2(5IA2)

[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ZZL_A_2(5IA1)

[Raw transfer]




ANP_A_2(5I9W)

[Raw transfer]




DXK_A_4(6FNH)
EPHA2_HUMAN
[Raw transfer]




DB8_A_2(5I9X)

[Raw transfer]




DXK_B_16(6FNH)
EPHA2_HUMAN
[Raw transfer]




90 HHSearch 68.7662%-135 - C4 -6FNG 11.6
55 Blastp_CBE 67.9861%-148 - C4 -2XYU 6.8
86 HHSearch 67.8161%-135 * C4 *2QOC 4.6
30 Blastp_CBE 60.9662% -11 - C4 -5NKE 7.8
92 HHSearch 60.9162% -8 - C4 -5NKH 8.2
27 Blastp_CBE 60.6662% -8 - C4 -5NKH 8.3
24 Blastp_CBE 60.1962% -38 - C4 -6FNG 11.6
42 Blastp_CBE 60.1562% -10 - C4 -5NK2 6.7
44 Blastp_CBE 60.0462% -34 - C4 -5NK0 7.1
17 PsiBlast_PDB 60.0461% -34 - C4 -5I9V 5.5
28 Blastp_CBE 60.0162% -9 - C4 -5NKG 7.0
29 Blastp_CBE 59.9062% -8 - C4 -5NKF 7.4
39 Blastp_CBE 59.5262% -10 - C4 -5NK5 7.4
48 Blastp_CBE 59.5062% -14 - C4 -5IA2 8.3
37 Blastp_CBE 59.4262% -9 - C4 -5NK7 6.5
35 Blastp_CBE 59.4162% -9 - C4 -5NK9 7.3
21 Blastp_CBE 59.4162% -41 - C4 -6FNH 4.9
50 Blastp_CBE 59.4062% -40 - C4 -5IA0 6.8
31 Blastp_CBE 59.1962% -13 - C4 -5NKD 6.7
53 Blastp_CBE 59.1862% -39 - C4 -5I9Z 6.7
45 Blastp_CBE 59.1662% -37 - C4 -5NJZ 6.4
32 Blastp_CBE 59.1562% -12 - C4 -5NKC 6.1
23 Blastp_CBE 59.0762% -13 - C4 -6FNH 4.8 EPHA2_HUMAN
43 Blastp_CBE 59.0162% -11 - C4 -5NK1 7.5
18 PsiBlast_PDB 58.9761% -36 - C4 -5I9W 4.3
36 Blastp_CBE 58.9662% -34 - C4 -5NK8 7.9
34 Blastp_CBE 58.9462% -29 - C4 -5NKA 7.7
51 Blastp_CBE 58.8962% -38 - C4 -5IA0 7.1 EPHA2_HUMAN
19 PsiBlast_PDB 58.8961% -10 - C4 -5I9X 7.3
40 Blastp_CBE 58.8862% -9 - C4 -5NK4 6.9
20 PsiBlast_PDB 58.8161% -10 - C4 -5I9Y 6.6
26 Blastp_CBE 58.4362% -35 - C4 -5NKI 6.9
38 Blastp_CBE 58.4262% -7 - C4 -5NK6 6.9
33 Blastp_CBE 58.3062% -5 - C4 -5NKB 6.8
41 Blastp_CBE 58.2462% -15 - C4 -5NK3 6.7
54 Blastp_CBE 58.2062% -42 - C4 -1MQB 4.2
15 PsiBlast_PDB 57.9461% -35 - C4 -1MQB 4.4 EPHA2_HUMAN
22 Blastp_CBE 57.2862% -7 - C4 -6FNH 4.7 EPHA2_HUMAN
46 Blastp_CBE 57.1362% -10 - C4 -5IA5 11.6
49 Blastp_CBE 57.0162% -36 - C4 -5IA1 7.2
25 Blastp_CBE 56.7062% -34 - C4 -6FNF 11.3
52 Blastp_CBE 56.6162% -35 - C4 -5IA0 7.2 EPHA2_HUMAN
47 Blastp_CBE 56.5562% -9 - C4 -5IA4 11.8