@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHB1_HUMAN: (2019-05-20 )
MALDYLLLLLLASAVAAMEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCRTGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADRRSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQAAPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQISQSPTAMA

Atome Classification :

(83 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




1N1_A_2(6FNM)

[Raw transfer]




8ZZ_A_2(5NK2)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




DWT_A_3(6FNJ)
EPHB4_HUMAN
[Raw transfer]




DWT_A_2(6FNG)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




8ZW_A_2(5NKI)

[Raw transfer]




DWT_A_2(6FNG)

[Raw transfer]




92Q_A_2(5NK3)

[Raw transfer]




8ZQ_A_2(5NKH)

[Raw transfer]




7O3_A_3(5MJB)
EPHB1_HUMAN
[Raw transfer]




90W_A_2(5NK6)

[Raw transfer]




DXH_A_2(6FNF)

[Raw transfer]




90N_A_2(5NK1)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




91K_A_2(5NKD)

[Raw transfer]




90T_A_2(5NKC)

[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




8ZH_A_2(5NJZ)

[Raw transfer]




7O3_A_3(5MJA)
EPHB1_HUMAN
[Raw transfer]




8ZT_A_2(5NKB)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




90E_A_2(5NK4)

[Raw transfer]




8ZN_A_2(5NKF)

[Raw transfer]




90Z_A_2(5NK8)

[Raw transfer]




DWT_B_4(6FNJ)

[Raw transfer]




90B_A_2(5NKE)

[Raw transfer]




1N1_A_2(5I9Y)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




88Z_A_2(5IA4)

[Raw transfer]




8ZZ_A_2(5NK7)

[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




GV0_A_2(5IA5)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




91E_A_2(5NK0)

[Raw transfer]




Q7M_A_2(4P5Z)

[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




90K_A_2(5NK5)

[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




912_A_2(5NK9)

[Raw transfer]




6P8_A_2(5L6P)

[Raw transfer]




8ZK_A_2(5NKG)

[Raw transfer]




6P6_A_2(5L6O)

[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




DXK_A_2(6FNK)

[Raw transfer]




91H_A_2(5NKA)

[Raw transfer]




DXK_A_2(6FNK)

[Raw transfer]




627_A_2(5I9Z)

[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




DXK_C_21(6FNH)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




DXK_A_4(6FNH)
EPHA2_HUMAN
[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




A5B_A_4(5IA0)
EPHA2_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




L66_A_2(5IA2)

[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




A5B_B_11(5IA0)
EPHA2_HUMAN
[Raw transfer]




AGS_A_2(5I9V)

[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




DB8_A_2(5I9X)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




ZZL_A_2(5IA1)

[Raw transfer]




A5B_C_21(5IA0)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




DXK_B_16(6FNH)
EPHA2_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ANP_A_2(5I9W)

[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




3 PsiBlast_PDB 78.8798%-128 - C2 -5MJB 7.4 EPHB1_HUMAN
2 PsiBlast_PDB 78.4298%-133 - C2 -5MJA 7.1 EPHB1_HUMAN
30 Blastp_CBE 77.3488%-136 - C2 -6FNM 7.2
15 PsiBlast_PDB 77.1985%-129 - C2 -2VWX 6.6
14 PsiBlast_PDB 77.1989%-135 - C2 -5L6P 6.0
19 PsiBlast_PDB 76.9785%-130 - C2 -2VX1 7.3
31 Blastp_CBE 76.8988%-131 - C2 -6FNK 4.7
17 PsiBlast_PDB 76.6585%-123 - C2 -2VWZ 7.4
16 PsiBlast_PDB 76.5785%-125 - C2 -2VWY 7.3
18 PsiBlast_PDB 76.5285%-126 - C2 -2VX0 7.4
150 HHSearch 76.0788%-133 - C2 -6FNK 4.7
22 Blastp_CBE 75.8685%-138 - C2 -4BB4 6.8
13 PsiBlast_PDB 75.5189%-138 - C2 -5L6O 6.3
20 PsiBlast_PDB 75.3285%-130 - C2 -2X9F 7.0
23 Blastp_CBE 75.0885%-129 - C2 -2XVD 7.3
27 Blastp_CBE 74.8768%-130 - C2 -3FXX 4.0
42 Blastp_CBE 74.6987%-134 - C2 -4AW5 7.5
32 Blastp_CBE 74.5388%-137 - C2 -6FNJ 12.2
54 Blastp_CBE 74.4380%-138 - C2 -3DKO 8.4
4 PsiBlast_PDB 74.4087%-133 - C2 -1JPA 4.1 EPHB2_MOUSE
57 Blastp_CBE 74.0081%-145 - C2 -2Y6O 7.4
58 Blastp_CBE 73.8781%-139 - C2 -2Y6M 2.6
21 Blastp_CBE 73.7288%-135 - C2 -1JPA 4.2
28 Blastp_CBE 73.6988%-142 - C2 -2YN8 8.4
59 Blastp_CBE 73.5881%-148 - C2 -2XYU 7.1
33 Blastp_CBE 73.5388%-136 - C2 -6FNJ 12.2 EPHB4_HUMAN
39 Blastp_CBE 73.4888%-137 - C2 -2HEN 4.7 EPHB2_MOUSE
37 Blastp_CBE 73.4288%-132 - C2 -2HEN 5.1 EPHB2_MOUSE
36 Blastp_CBE 73.3888%-136 - C2 -2HEN 5.6
38 Blastp_CBE 73.1688%-136 - C2 -2HEN 5.3 EPHB2_MOUSE
43 Blastp_CBE 72.8470%-130 - C2 -2QOC 4.5
149 HHSearch 72.4579%-135 - C2 -2QOC 4.5
40 Blastp_CBE 72.3168%-127 - C2 -2QOQ 4.4
51 Blastp_CBE 72.2570%-133 - C2 -4G2F 5.8
63 Blastp_CBE 72.0173%-128 - C2 -6FNH 4.9 EPHA2_HUMAN
24 Blastp_CBE 71.9568%-130 - C2 -2QO9 4.3
45 Blastp_CBE 71.7870%-136 - C2 -4TWN 12.0
44 Blastp_CBE 71.6070%-127 - C2 -4TWO 6.2
82 Blastp_CBE 71.5273%-119 - C2 -5NK2 7.8
41 Blastp_CBE 71.4968%-128 - C2 -2QO7 4.4
29 Blastp_CBE 71.4988%-144 - C2 -2YN8 8.5 EPHB4_HUMAN
81 Blastp_CBE 71.3873%-128 - C2 -5NK3 7.4
88 Blastp_CBE 71.3773%-115 - C2 -5IA2 8.1
80 Blastp_CBE 71.0673%-122 - C2 -5NK4 7.9
91 Blastp_CBE 71.0573%-137 - C2 -5IA0 7.0 EPHA2_HUMAN
52 Blastp_CBE 71.0370%-135 - C2 -3DZQ 10.8
62 Blastp_CBE 70.9973%-129 - C2 -6FNH 4.8 EPHA2_HUMAN
69 Blastp_CBE 70.9373%-118 - C2 -5NKF 8.2
72 Blastp_CBE 70.7973%-125 - C2 -5NKC 6.6
71 Blastp_CBE 70.6973%-123 - C2 -5NKD 7.1
46 Blastp_CBE 70.6870%-139 - C2 -4P5Z 10.0
94 Blastp_CBE 70.5473%-122 - C2 -5I9Y 7.9
93 Blastp_CBE 70.5173%-135 - C2 -5I9Z 6.6
95 Blastp_CBE 70.4473%-121 - C2 -5I9X 7.6
96 Blastp_CBE 70.3273%-141 - C2 -5I9W 4.2
47 Blastp_CBE 70.2970%-134 - C2 -4P4C 6.1
66 Blastp_CBE 70.0773%-142 - C2 -5NKI 7.7
78 Blastp_CBE 70.0673%-123 - C2 -5NK6 8.0
77 Blastp_CBE 70.0173%-121 - C2 -5NK7 7.4
83 Blastp_CBE 70.0073%-122 - C2 -5NK1 8.0
90 Blastp_CBE 69.9873%-130 - C2 -5IA0 6.7
85 Blastp_CBE 69.8673%-139 - C2 -5NJZ 7.2
75 Blastp_CBE 69.8473%-119 - C2 -5NK9 7.9
60 Blastp_CBE 69.8367%-132 - C2 -3KUL 3.0 EPHA8_HUMAN
61 Blastp_CBE 69.7573%-133 - C2 -6FNH 5.1
87 Blastp_CBE 69.6973%-128 - C2 -5IA4 11.9
86 Blastp_CBE 69.5773%-124 - C2 -5IA5 11.7
92 Blastp_CBE 69.4573%-138 - C2 -5IA0 7.0 EPHA2_HUMAN
89 Blastp_CBE 69.2973%-140 - C2 -5IA1 7.1
64 Blastp_CBE 69.0173%-136 - C2 -6FNG 11.7
73 Blastp_CBE 68.7373%-119 - C2 -5NKB 7.8
100 Blastp_CBE 68.6771%-137 - C2 -1MQB 4.3 EPHA2_HUMAN
99 Blastp_CBE 68.6771%-134 - C2 -1MQB 4.3
154 HHSearch 68.2772%-137 * C2 *6FNG 11.7
65 Blastp_CBE 67.2073%-134 - C2 -6FNF 11.9
70 Blastp_CBE 63.7673% -39 - C2 -5NKE 8.0
67 Blastp_CBE 63.7373% -35 - C2 -5NKH 8.6
79 Blastp_CBE 62.9573% -38 - C2 -5NK5 7.5
68 Blastp_CBE 62.8873% -34 - C2 -5NKG 7.7
97 Blastp_CBE 62.2773% -43 - C2 -5I9V 5.5
74 Blastp_CBE 61.6973% -37 - C2 -5NKA 7.4
84 Blastp_CBE 61.1773% -46 - C2 -5NK0 7.3
76 Blastp_CBE 60.7073% -42 - C2 -5NK8 7.9