@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK4_HUMAN: (2019-05-25 )
MKAARFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPVFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVAM

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]




7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




23 Blastp_CBE 92.38100%-121 - C7 -3D2R 7.9 PDK4_HUMAN
24 Blastp_CBE 90.87100%-122 - C7 -2ZKJ 8.0 PDK4_HUMAN
1 PsiBlast_PDB 90.4499%-120 - C7 -2E0A 9.1 PDK4_HUMAN
4 PsiBlast_PDB 90.39100%-131 - C7 -2ZKJ 7.6 PDK4_HUMAN
5 PsiBlast_PDB 89.79100%-131 - C7 -3D2R 7.6 PDK4_HUMAN
22 Blastp_CBE 89.3599%-126 - C7 -2E0A 8.4 PDK4_HUMAN
3 PsiBlast_PDB 89.0099%-114 - C7 -2ZDY 7.0 PDK4_HUMAN
2 PsiBlast_PDB 87.7299%-132 - C7 -2ZDX 4.5 PDK4_HUMAN
21 Blastp_CBE 87.0199%-124 - C7 -2ZDX 4.8 PDK4_HUMAN
55 HHSearch 81.8596% -36 - C7 -3D2R 7.9 PDK4_HUMAN
18 PsiBlast_PDB 81.5666%-128 - C7 -2BU2 5.7 PDK2_HUMAN
16 PsiBlast_PDB 80.0266%-127 - C7 -5J71 4.8 PDK2_HUMAN
27 Blastp_CBE 79.4165%-131 - C7 -1JM6 6.6 PDK2_RAT
14 PsiBlast_PDB 79.2065%-128 - C7 -5M4P 8.0 PDK2_HUMAN
25 Blastp_CBE 79.0665% -62 - C7 -3CRL 5.6 PDK2_RAT
36 Blastp_CBE 79.0363% -60 - C7 -1Y8P 8.0 PDK3_HUMAN
56 HHSearch 79.0196% -32 - C7 -2E0A 9.1 PDK4_HUMAN
12 PsiBlast_PDB 78.9365%-129 - C7 -5M4M 4.9 PDK2_HUMAN
37 Fugue 78.8967%-131 - C7 -1JM6 6.4 PDK2_RAT
7 PsiBlast_PDB 78.8465%-133 - C7 -1JM6 6.4 PDK2_RAT
30 Blastp_CBE 78.6967%-128 - C7 -4V26 7.5 PDK2_HUMAN
10 PsiBlast_PDB 78.6465%-127 - C7 -4V25 6.4 PDK2_HUMAN
9 PsiBlast_PDB 78.5265% -64 - C7 -3CRL 5.6 PDK2_RAT
53 HHSearch 78.5165% -59 - C7 -3CRL 5.6 PDK2_RAT
11 PsiBlast_PDB 77.6065%-132 - C7 -5M4K 4.1 PDK2_HUMAN
13 PsiBlast_PDB 77.4065%-129 - C7 -5M4N 6.1 PDK2_HUMAN
28 Blastp_CBE 76.1166% -60 - C7 -2BU8 4.6 PDK2_HUMAN
31 Blastp_CBE 76.0663% -66 - C7 -2Q8I 5.8 PDK3_HUMAN
15 PsiBlast_PDB 76.0366% -58 - C7 -4MP2 3.7 PDK2_HUMAN
54 HHSearch 65.9461% -40 - C7 -5J71 4.8 PDK2_HUMAN