@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ALK_HUMAN: (2019-04-27 )
MGAIGLLWLLPLLLSTAAVGSGMGTGQRAGSPAAGPPLQPREPLSYSRLQRKSLAVDFVVPSLFRVYARDLLLPPSSSELKAGRPEARGSLALDCAPLLRLLGPAPGVSWTAGSPAPAEARTLSRVLKGGSVRKLRRAKQLVLELGEEAILEGCVGPPGEAAVGLLQFNLSELFSWWIRQGEGRLRIRLMPEKKASEVGREGRLSAAIRASQPRLLFQIFGTGHSSLESPTNMPSPSPDYFTWNLTWIMKDSFPFLSHRSRYGLECSFDFPCELEYSPPLHDLRNQSWSWRRIPSEEASQMDLLDGPGAERSKEMPRGSFLLLNTSADSKHTILSPWMRSSSEHCTLAVSVHRHLQPSGRYIAQLLPHNEAAREILLMPTPGKHGWTVLQGRIGRPDNPFRVALEYISSGNRSLSAVDFFALKNCSEGTSPGSKMALQSSFTCWNGTVLQLGQACDFHQDCAQGEDESQMCRKLPVGFYCNFEDGFCGWTQGTLSPHTPQWQVRTLKDARFQDHQDHALLLSTTDVPASESATVTSATFPAPIKSSPCELRMSWLIRGVLRGNVSLVLVENKTGKEQGRMVWHVAAYEGLSLWQWMVLPLLDVSDRFWLQMVAWWGQGSRAIVAFDNISISLDCYLTISGEDKILQNTAPKSRNLFERNPNKELKPGENSPRQTPIFDPTVHWLFTTCGASGPHGPTQAQCNNAYQNSNLSVEVGSEGPLKGIQIWKVPATDTYSISGYGAAGGKGGKNTMMRSHGVSVLGIFNLEKDDMLYILVGQQGEDACPSTNQLIQKVCIGENNVIEEEIRVNRSVHEWAGGGGGGGGATYVFKMKDGVPVPLIIAAGGGGRAYGAKTDTFHPERLENNSSVLGLNGNSGAAGGGGGWNDNTSLLWAGKSLQEGATGGHSCPQAMKKWGWETRGGFGGGGGGCSSGGGGGGYIGGNAASNNDPEMDGEDGVSFISPLGILYTPALKVMEGHGEVNIKHYLNCSHCEVDECHMDPESHKVICFCDHGTVLAEDGVSCIVSPTPEPHLPLSLILSVVTSALVAALVLAFSGIMIVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSKNSMNQPGP

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5P8_A_2(5AA8)

[Raw transfer]




5P8_A_2(5AA9)

[Raw transfer]




QB4_A_2(4CLJ)

[Raw transfer]




53P_A_2(5A9U)

[Raw transfer]




GWH_A_2(4CMT)

[Raw transfer]




YPW_A_2(4CMO)

[Raw transfer]




OFG_A_2(4CCB)

[Raw transfer]




IV7_A_2(4CMU)

[Raw transfer]




AWJ_A_2(4CD0)

[Raw transfer]




J99_A_2(4CTC)

[Raw transfer]




VGH_A_2(4ANQ)

[Raw transfer]




VGH_A_2(2YFX)

[Raw transfer]




5P8_A_2(4CLI)

[Raw transfer]




6YL_A_2(5KZ0)

[Raw transfer]




VGH_A_2(5AAA)

[Raw transfer]




VGH_A_2(5AAC)

[Raw transfer]




3U9_A_3(4CNH)
ALK_HUMAN
[Raw transfer]




VGH_A_2(4ANS)

[Raw transfer]




AWF_A_2(4CCU)

[Raw transfer]




YMX_A_2(5FTO)

[Raw transfer]




VGH_A_2(2XP2)

[Raw transfer]




U4W_A_2(5FTQ)

[Raw transfer]




571_A_2(2XBA)

[Raw transfer]




VGH_A_2(5AAB)

[Raw transfer]




KVC_A_2(4CTB)

[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




45Q_A_2(5IUI)

[Raw transfer]




4LO_A_4(4Z55)

[Raw transfer]




729_A_2(5IUG)

[Raw transfer]




34Y_A_2(5IUH)

[Raw transfer]




GUI_A_2(2XB7)

[Raw transfer]




I3K_A_2(4FNY)

[Raw transfer]




ADP_A_3(3LCT)

[Raw transfer]




4MK_A_4(4MKC)

[Raw transfer]




NZF_A_2(4FNZ)

[Raw transfer]




6GY_A_2(6MX8)

[Raw transfer]




0US_A_2(4FOB)

[Raw transfer]




STU_A_2(3LCS)

[Raw transfer]




0JF_B_4(4DCE)

[Raw transfer]




CZ4_A_2(5IMX)

[Raw transfer]




0JF_A_3(4DCE)
ALK_HUMAN
[Raw transfer]




3DK_A_2(4JOA)

[Raw transfer]




0UV_A_2(4FOD)

[Raw transfer]




0UU_A_2(4FOC)

[Raw transfer]




EMH_A_2(3AOX)

[Raw transfer]




EDO_A_4(4TT7)

[Raw transfer]




3U9_B_5(4CNH)

[Raw transfer]




15 PsiBlast_PDB 81.3099%-129 - C1 -5IUI 8.0
3 PsiBlast_PDB 78.24100%-130 - C1 -3AOX 8.7
35 Blastp_CBE 76.8799%-131 - C1 -5AAA 7.1
30 Blastp_CBE 76.4699%-129 - C1 -4CMO 6.3
36 Blastp_CBE 76.1699%-133 - C1 -5AA9 7.2
11 PsiBlast_PDB 76.0999%-125 - C1 -4FOD 10.1
7 PsiBlast_PDB 75.9799%-125 - C1 -3LCS 8.9
28 Blastp_CBE 75.1599%-130 - C1 -4CMU 7.3
5 PsiBlast_PDB 74.2899%-124 - C1 -4MKC 9.4
6 PsiBlast_PDB 74.1399%-121 - C1 -3LCT 3.7
46 Blastp_CBE 73.19100%-131 - C1 -5FTO 9.8
39 Blastp_CBE 73.1599%-132 - C1 -4ANS 7.3
4 PsiBlast_PDB 72.9699%-122 - C1 -3L9P 2.6
37 Blastp_CBE 72.9499%-132 - C1 -4CD0 7.7
25 Blastp_CBE 72.7599%-131 - C1 -4CTB 8.6
38 Blastp_CBE 72.2799%-130 - C1 -4ANQ 7.4
42 Blastp_CBE 72.0399%-131 - C1 -5AAB 6.9
31 Blastp_CBE 72.0099%-130 - C1 -4CLI 7.6
34 Blastp_CBE 71.9299%-131 - C1 -2YFX 7.2
43 Blastp_CBE 71.8599%-131 - C1 -5AA8 7.5
24 Blastp_CBE 70.3199%-131 - C1 -4CTC 7.9
33 Blastp_CBE 69.7899%-128 - C1 -4CLJ 7.4
41 Blastp_CBE 68.5599%-127 - C1 -5A9U 7.6
32 Blastp_CBE 68.3499%-130 - C1 -4CCU 7.6
9 PsiBlast_PDB 68.1999%-129 - C1 -4Z55 9.6
40 Blastp_CBE 67.8599%-127 - C1 -5AAC 7.3
22 Blastp_CBE 67.4099%-125 - C1 -5KZ0 6.7
2 PsiBlast_PDB 64.9599%-125 - C1 -4FOC 8.2
45 Blastp_CBE 63.62100%-129 - C1 -5FTQ 10.0
27 Blastp_CBE 63.5099%-132 - C1 -4CNH 6.1 ALK_HUMAN
48 Blastp_CBE 62.67100%-127 - C1 -2XB7 8.3
26 Blastp_CBE 62.1299%-130 - C1 -4CNH 5.3
47 Blastp_CBE 61.78100%-135 - C1 -2XBA 7.4
20 PsiBlast_PDB 61.7499%-131 - C1 -4CCB 7.0
19 PsiBlast_PDB 60.6799%-132 - C1 -2XP2 7.3
21 Blastp_CBE 60.5599%-129 - C1 -4DCE 10.1
29 Blastp_CBE 60.4899%-131 - C1 -4CMT 7.2
10 PsiBlast_PDB 58.8799%-124 - C1 -4DCE 9.6 ALK_HUMAN
12 PsiBlast_PDB 57.1699%-123 - C1 -4FNZ 10.1
44 Blastp_CBE 57.0999%-126 - C1 -4TT7 2.6
49 Blastp_CBE 56.57100%-133 * C1 *6MX8 7.9
14 PsiBlast_PDB 55.2699%-132 - C1 -5IUH 10.0
1 PsiBlast_PDB 54.9699%-125 - C1 -4FOB 9.1
13 PsiBlast_PDB 51.5999%-127 - C1 -5IUG 10.4
17 PsiBlast_PDB 39.5599%-129 - C1 -4FNY 10.4
23 Blastp_CBE 22.4199%-126 - C1 -5IMX 8.5
8 PsiBlast_PDB 20.0099%-141 - C1 -4JOA 8.0