@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CDK12_HUMAN: (2019-04-27 )
MPNSERHGGKKDGSGGASGTLQPSSGGGSSNSRERHRLVSKHKRHKSKHSKDMGLVTPEAASLGTVIKPLVEYDDISSDSDTFSDDMAFKLDRRENDERRGSDRSDRLHKHRHHQHRRSRDLLKAKQTEKEKSQEVSSKSGSMKDRISGSSKRSNEETDDYGKAQVAKSSSKESRSSKLHKEKTRKERELKSGHKDRSKSHRKRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPSGASYGQDYDLSPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVNVTHLNTEVKNSSDTGKVKLDENSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETPPPLPTIASPPPPLPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPPSTHSKTSAVSSQANSQPPVQVSVKTQVSVTAAIPHLKTSTLPPLPLPPLLPGDDDMDSPKETLPSKPVKKEKEQRTRHLLTDLPLPPELPGGDLSPPDSPEPKAITPPQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCHELWSKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIGLADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEATSQQQDSETMAPEESLKEAPSAPVILPSAEQTTLEASSTPADMQNILAVLLSQLMKTQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAACPPHILPPEKRPPEPPGPPPPPPPPPLVEGDLSSAPQELNPAVTAALLQLLSQPEAEPPGHLPHEHQALRPMEYSTRPRPNRTYGNTDGPETGFSAIDTDERNSGPALTESLVQTLVKNRTFSGSLSHLGESSSYQGTGSVQFPGDQDLRFARVPLALHPVVGQPFLKAEGSSNSVVHAETKLQNYGELGPGTTGASSSGAGLHWGGPTQSSAYGKLYRGPTRVPPRGGRGRGVPY

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_12(4NST)

[Raw transfer]



ADP_A_5(4NST)
CDK12_HUMAN
[Raw transfer]



ADP_A_5(5EFQ)
CDK13_HUMAN
[Raw transfer]



ADP_C_9(5EFQ)

[Raw transfer]



ANP_A_5(4CXA)
CDK12_HUMAN
[Raw transfer]



CJM_A_6(6B3E)
CDK12_HUMAN
[Raw transfer]



CJM_C_11(6B3E)

[Raw transfer]



5I1_C_5(5ACB)
CDK12_HUMAN
[Raw transfer]



8M1_C_9(6CKX)

[Raw transfer]



8M1_A_6(6CKX)
CDK12_HUMAN
[Raw transfer]



5I1_D_6(5ACB)

[Raw transfer]
3 PsiBlast_PDB 90.6599%-110 - C1 -4CXA 6.4 CDK12_HUMAN
1 PsiBlast_PDB 84.6299%-109 - C1 -4NST 6.2 CDK12_HUMAN
4 PsiBlast_PDB 84.2499%-116 - C1 -5ACB 8.1 CDK12_HUMAN
23 Blastp_CBE 79.3899%-117 - C1 -5ACB 6.8
22 Blastp_CBE 79.1999%-119 - C1 -4NST 6.1
6 PsiBlast_PDB 79.1899%-116 - C1 -6B3E 8.6 CDK12_HUMAN
25 Blastp_CBE 78.2191%-110 - C1 -5EFQ 6.3
7 PsiBlast_PDB 73.8390%-113 * C1 *5EFQ 6.0 CDK13_HUMAN
24 Blastp_CBE 72.5499%-121 - C1 -6B3E 9.1
21 Blastp_CBE 58.4399%-131 - C1 -6CKX 7.6
2 PsiBlast_PDB 58.0999%-131 - C1 -6CKX 7.9 CDK12_HUMAN