@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CDK19_HUMAN: (2019-04-27 )
MDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPQAPPPQQNSTQTNGTAGGAGAGVGGTGAGLQHSQDSSLNQVPPNKKPRLGPSGANSGGPVMPSDYQHSSSRLNYQSSVQGSSQSQSTLGYSSSSQQSSQYHPSHQAHRY

Atome Classification :

(8 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5Y6_A_3(5HBE)
CDK8_HUMAN
[Raw transfer]




5Y8_A_3(5HBJ)
CDK8_HUMAN
[Raw transfer]




5XG_A_3(5FGK)
CDK8_HUMAN
[Raw transfer]




68U_A_3(5I5Z)
CDK8_HUMAN
[Raw transfer]




62M_A_3(5HNB)
CDK8_HUMAN
[Raw transfer]




6A6_A_3(5IDP)
CDK8_HUMAN
[Raw transfer]




69Z_A_3(5ICP)
CDK8_HUMAN
[Raw transfer]




6A7_A_3(5IDN)
CDK8_HUMAN
[Raw transfer]




20 PsiBlast_PDB 61.3791%-121 - C1 -5HNB 6.7 CDK8_HUMAN
24 Blastp_CBE 59.3293%-136 * C1 *5FGK 6.9 CDK8_HUMAN
18 PsiBlast_PDB 56.2192%-116 - C1 -5IDP 6.0 CDK8_HUMAN
21 Blastp_CBE 55.5593%-118 - C1 -5ICP 6.8 CDK8_HUMAN
22 Blastp_CBE 53.4293%-127 - C1 -5HBJ 6.5 CDK8_HUMAN
17 PsiBlast_PDB 53.4292%-125 - C1 -5IDN 7.9 CDK8_HUMAN
23 Blastp_CBE 50.9793%-117 - C1 -5HBE 6.4 CDK8_HUMAN
19 PsiBlast_PDB 50.2791%-115 - C1 -5I5Z 6.6 CDK8_HUMAN