@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : RIPK1_HUMAN: (2019-05-03 )
MQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYLHGKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFANKEPYENAICEQQLIMCIKSGNRPDVDDITEYCPREIISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCVAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPFSSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTDKHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKLAQALHQCSRIDLLSSLIYVSQN

Atome Classification :

(15 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EJP_A_5(6C4D)
RIPK1_HUMAN
[Raw transfer]




EJP_B_6(6C4D)
RIPK1_HUMAN
[Raw transfer]




EJP_D_8(6C4D)
RIPK1_HUMAN
[Raw transfer]




65U_A_3(5HX6)
RIPK1_HUMAN
[Raw transfer]




EJP_C_7(6C4D)
RIPK1_HUMAN
[Raw transfer]




65U_B_4(5HX6)
RIPK1_HUMAN
[Raw transfer]




7MJ_B_4(5TX5)
RIPK1_HUMAN
[Raw transfer]




Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]




EJY_A_3(6C3E)
RIPK1_HUMAN
[Raw transfer]




G4W_A_3(6HHO)
RIPK1_HUMAN
[Raw transfer]




EJY_B_4(6C3E)
RIPK1_HUMAN
[Raw transfer]




1HX_B_9(4ITJ)
RIPK1_HUMAN
[Raw transfer]




1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]




1HW_B_4(4ITI)
RIPK1_HUMAN
[Raw transfer]




1HW_A_3(4ITI)
RIPK1_HUMAN
[Raw transfer]




1 PsiBlast_PDB 93.62100%-117 - C1 -4NEU 10.1 RIPK1_HUMAN
23 Blastp_CBE 89.0099%-117 - C1 -4ITJ 7.9 RIPK1_HUMAN
4 PsiBlast_PDB 85.5498%-133 - C1 -4ITI 8.5 RIPK1_HUMAN
25 Blastp_CBE 84.1399%-143 - C1 -6C4D 11.0 RIPK1_HUMAN
2 PsiBlast_PDB 84.0098%-141 - C1 -5HX6 9.3 RIPK1_HUMAN
5 PsiBlast_PDB 83.8898%-134 - C1 -4ITJ 7.8 RIPK1_HUMAN
27 Blastp_CBE 83.3999%-130 - C1 -6C4D 11.2 RIPK1_HUMAN
6 PsiBlast_PDB 83.3298%-127 - C1 -6C4D 11.4 RIPK1_HUMAN
24 Blastp_CBE 82.6099%-128 - C1 -4ITI 7.1 RIPK1_HUMAN
3 PsiBlast_PDB 81.7298%-120 - C1 -6HHO 9.8 RIPK1_HUMAN
22 Blastp_CBE 81.3999%-141 * C1 *5HX6 9.7 RIPK1_HUMAN
26 Blastp_CBE 80.4199%-134 - C1 -6C4D 11.0 RIPK1_HUMAN
28 Blastp_CBE 79.9998%-136 - C1 -6C3E 6.9 RIPK1_HUMAN
7 PsiBlast_PDB 78.8798%-132 - C1 -6C3E 7.8 RIPK1_HUMAN
21 Blastp_CBE 77.6799%-132 - C1 -5TX5 9.6 RIPK1_HUMAN