Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKRRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPI-----QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW--NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL
4YHT Chain:B ((18-203))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV--LRKTRHVNILLFMGY-----STKPQLAIVTQWCEGSSLYHHLHTNETKFEMTKLIDIARQTAQGMDYLHAK----------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------SGSILWMAPEVIR--MQD--PYSFQSDVYAFGIVLYELMT------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 749 -18773 -25.06 -113.78
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -25.06
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.094

(partial model without unconserved sides chains):
PDB file : Tito_4YHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4yht-query.scw
PDB file : Tito_Scwrl_4YHT.pdb: