Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKY------SLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYLHGKG--VIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFANKEP------YENAICEQQLIMCIKSGNRPDVDDITEYCP-----REIISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCVAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPFSSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTDKHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKLAQALHQCSRIDLLSSLIYVSQN
4M69 Chain:A ((31-311))-------------------------GGFGVVFRAHHRTWNHDVAVK-------IVNSKKISWEVKAMVNLRNENVLLLLGVT-EDLQWDFVSGQALVTRFMENGSLAGLLQPECPRPWPLLCRLLQEVVLGMCYLHSLDPPLLHRDLKPSNILLDPELHAKLADFGLSTFQGG---------------------GGTLAYLDPELLFKVNLKASKASDVYSFGILVWAVLAGREAELVDKLIRETVCDRQ--------SRPPLTELPPGSPETPGLEKLKELMIHCWGSQSENRPSFQDCEPKTNEVY-NLVKDKVDAAVSEVKHYLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1225 -20062 -16.38 -81.55
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -16.38
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.116

(partial model without unconserved sides chains):
PDB file : Tito_4M69.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4m69-query.scw
PDB file : Tito_Scwrl_4M69.pdb: