Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFH--RTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGK-YSLVMEYMEKGNLMHVLKAEMSTPLSVKGR----------IILEIIEGMCYLHGKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFAN-KEPYENAICEQQLIMCIKSGNRPDVDDITEYCPREIISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCVAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPFSSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTDKHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKLAQALHQCSRIDLLSSLIYVSQN
1QCF Chain:A ((173-454))KPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKS--------DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG------------AKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-PEVIRALERGYRMPR---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT--ATESQEEIP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1QCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1344 46532 34.62 175.59
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 34.62
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_1QCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1qcf-query.scw
PDB file : Tito_Scwrl_1QCF.pdb: