Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHPSLLSPTSLGPSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGVGYGPSISPQLNSHMNSVSSSEDIKPPLGLNGVMKVPAQPSGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKERSENEVESTSSANEDMPVEKILEAELAVEPKTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
4POJ Chain:A ((1-231))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDMPVERILEAELAVE-----------------PNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAP----


General information:
TITO was launched using:
RESULT:

Template: 4POJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 933 -124742 -133.70 -582.90
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -133.70
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_4POJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4poj-query.scw
PDB file : Tito_Scwrl_4POJ.pdb: