Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTSQPGACPCQGAASRPAILYALLSSSLKAVPRPRSRCLCRQHRPVQLCAPHRTCREALDVLAKTVAFLRNLPSFWQLPPQDQRRLLQGCWGPLFLLGLAQDAVTFEVAEAPVPSILKKILLEEPSSSGGSGQLPDRPQPSLAAVQWLQCCLESFWSLELSPKEYACLKGTILFNPDVPGLQAASHIGHLQQEAHWVLCEVLEPWCPAAQGRLTRVLLTASTLKSIPTSLLGDLFFRPIIGDVDIAGLLGDMLLLR
4NUF Chain:A ((375-580))---------------------------------------------------PHRTCREALDVLAKTVAFLRNLPSFCHLPHDDQRRLLECCWGPLFLLGLAQDAVTFEVAEA---------------------------QPSLAAVQWLQRCLESFWSLELGPKEYAYLKGTILFNPDVPGLRASCHIAHLQQEAHWALCEVLEPWYPASQGRLARILLMASTLRNIPGTLLVDLFFRPIMGDVDITELLEDMLLLR


General information:
TITO was launched using:
RESULT:

Template: 4NUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 677 -146975 -217.10 -821.09
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -217.10
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_4NUF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4nuf-query.scw
PDB file : Tito_Scwrl_4NUF.pdb: