@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Z_NR2B2_RXRBA: (2019-06-04 )
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLKPLSSHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKERDGEVESSSAANEEMPVEKILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT

Atome Classification :

(96 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_A_5(4N8R)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
?
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
?
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_A_6(5ZQU)
?
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




4 PsiBlast_PDB 85.1879%-138 - C7 -5UAN 7.2 RXRA_HUMAN
2 PsiBlast_PDB 84.4073%-125 - C7 -3E00 7.7 RXRA_HUMAN
1 PsiBlast_PDB 83.8173%-126 - C7 -3DZU 7.2 RXRA_HUMAN
55 Blastp_CBE 79.0184%-145 - C7 -3OZJ 2.7 RXRA_HUMAN
71 Blastp_CBE 78.8984%-134 - C7 -1XDK 7.7 RXRA_MOUSE
70 Blastp_CBE 78.8384%-134 - C7 -1XDK 7.6 RXRA_MOUSE
45 Blastp_CBE 78.5883%-143 - C7 -2ZXZ 9.3 RXRA_HUMAN
43 Blastp_CBE 78.4983%-133 - C7 -2ZY0 9.2 RXRA_HUMAN
82 Blastp_CBE 78.4384%-134 - C7 -4RME 9.4 RXRA_HUMAN
100 Blastp_CBE 78.3684%-137 - C7 -4K4J 8.3 ?
109 Blastp_CBE 78.2684%-147 - C7 -1UHL 5.8
83 Blastp_CBE 78.2284%-133 - C7 -4RMD 9.9 RXRA_HUMAN
101 Blastp_CBE 78.1584%-132 - C7 -3OAP 7.7 RXRA_HUMAN
56 Blastp_CBE 78.1484%-134 - C7 -3OZJ 4.1 RXRA_HUMAN
93 Blastp_CBE 78.0984%-132 - C7 -4PP5 8.9 RXRA_HUMAN
6 PsiBlast_PDB 78.0883%-138 - C7 -4OC7 7.5 RXRA_HUMAN
95 Blastp_CBE 78.0284%-137 - C7 -4POJ 8.9 RXRA_HUMAN
107 Blastp_CBE 77.9384%-140 - C7 -5MJ5 9.6 RXRA_HUMAN
99 Blastp_CBE 77.9384%-134 - C7 -4K6I 9.4 ?
98 Blastp_CBE 77.8784%-139 - C7 -4M8E 8.4 RXRA_HUMAN
94 Blastp_CBE 77.8784%-133 - C7 -4PP3 8.8 RXRA_HUMAN
91 Blastp_CBE 77.8784%-130 - C7 -4RMC 8.2 RXRA_HUMAN
96 Blastp_CBE 77.8684%-138 - C7 -4POH 8.2 RXRA_HUMAN
92 Blastp_CBE 77.8684%-139 - C7 -4RFW 8.1 RXRA_HUMAN
35 Blastp_CBE 77.8183%-133 - C7 -3R5M 7.2 RXRA_HUMAN
33 Blastp_CBE 77.7683%-133 - C7 -4ZSH 8.1 RXRA_HUMAN
88 Blastp_CBE 77.7584%-139 - C7 -1DKF 7.3 RXRA_MOUSE
44 Blastp_CBE 77.7283%-132 - C7 -2ZY0 9.1 RXRA_HUMAN
97 Blastp_CBE 77.4984%-134 - C7 -4M8H 8.2 RXRA_HUMAN
106 Blastp_CBE 77.4384%-134 - C7 -5MK4 9.2 RXRA_HUMAN
16 PsiBlast_PDB 77.0983%-130 - C7 -1MZN 9.8 RXRA_HUMAN
104 Blastp_CBE 77.0784%-138 - C7 -5MMW 8.1
47 Blastp_CBE 76.4483%-130 - C7 -1MZN 9.9 RXRA_HUMAN
90 Blastp_CBE 74.8884%-127 - C7 -5Z12 7.4 RXRA_HUMAN
51 Blastp_CBE 74.6684%-132 - C7 -3UVV 7.9 RXRA_HUMAN
52 Blastp_CBE 74.4784%-143 - C7 -6A5Z 9.0 ?
103 Blastp_CBE 74.3884%-144 - C7 -3PCU 4.7 RXRA_HUMAN
18 PsiBlast_PDB 74.3483%-148 - C7 -2P1U 10.1 RXRA_HUMAN
20 PsiBlast_PDB 74.3083%-140 - C7 -3FUG 9.7 RXRA_HUMAN
53 Blastp_CBE 74.2684%-130 - C7 -6A5Z 8.6 ?
34 Blastp_CBE 74.2583%-145 - C7 -3R5M 6.6 RXRA_HUMAN
15 PsiBlast_PDB 74.1783%-136 - C7 -1MVC 10.2 RXRA_HUMAN
19 PsiBlast_PDB 74.1583%-139 - C7 -2P1V 10.3 RXRA_HUMAN
14 PsiBlast_PDB 74.0583%-133 - C7 -1MV9 8.8 RXRA_HUMAN
102 Blastp_CBE 74.0484%-144 - C7 -5MKJ 8.6 RXRA_HUMAN
105 Blastp_CBE 73.9984%-131 - C7 -5MK4 9.3 ?
17 PsiBlast_PDB 73.9283%-143 - C7 -2P1T 9.7 RXRA_HUMAN
32 Blastp_CBE 73.8883%-135 - C7 -5LYQ 10.6 RXRA_HUMAN
46 Blastp_CBE 73.8683%-133 - C7 -1MZN 9.8 RXRA_HUMAN
48 Blastp_CBE 73.8583%-136 - C7 -1MZN 9.8 RXRA_HUMAN
68 Blastp_CBE 73.4984%-139 - C7 -1RDT 9.8 RXRA_HUMAN
9 PsiBlast_PDB 73.3183%-141 - C7 -3E94 5.8 RXRA_HUMAN
54 Blastp_CBE 73.1284%-139 - C7 -6A5Y 8.7 ?
110 Blastp_CBE 73.0981%-143 - C7 -5EC9 10.2 ?
10 PsiBlast_PDB 72.8983%-143 - C7 -3KWY 7.5 RXRA_HUMAN
69 Blastp_CBE 72.8583%-123 - C7 -5JI0 7.0 RXRA_HUMAN
50 Blastp_CBE 72.7584%-120 - C7 -1FBY 8.0 RXRA_HUMAN
49 Blastp_CBE 72.7284%-124 - C7 -1FBY 8.1 RXRA_HUMAN
156 HHSearch 72.0894%-147 - C7 -4ZSH 8.1 RXRA_HUMAN
115 Blastp_CBE 71.6876%-118 - C7 -1XIU 8.1 RXR_BIOGL
154 HHSearch 71.4190%-122 - C7 -3H0A 8.2
89 Blastp_CBE 71.2884%-140 - C7 -5Z12 8.0 RXRA_HUMAN
168 HHSearch 71.2294%-160 - C7 -5EC9 10.1 ?
31 Blastp_CBE 71.0783%-147 - C7 -4N5G Error ?
29 Blastp_CBE 71.0283%-159 - C7 -4N8R Error ?
78 Blastp_CBE 70.8284% 10 - C7 -1XVP 5.8 RXRA_HUMAN
64 Blastp_CBE 70.5884% 8 - C7 -1FM9 8.7 RXRA_HUMAN
61 Blastp_CBE 70.4784% 5 - C7 -1K74 7.8 RXRA_HUMAN
24 Blastp_CBE 70.4484%-150 - C7 -5ZQU 3.5 ?
23 Blastp_CBE 70.2784%-155 - C7 -5ZQU 7.8 ?
108 Blastp_CBE 70.1984%-114 - C7 -3H0A 8.2
112 Blastp_CBE 70.1883%-157 - C7 -1H9U 9.0 RXRB_HUMAN
81 Blastp_CBE 70.1184% 1 - C7 -1XV9 6.0 RXRA_HUMAN
8 PsiBlast_PDB 70.0983%-115 - C7 -3A9E 9.2 RXRA_MOUSE
111 Blastp_CBE 70.0883%-154 - C7 -1H9U 9.1
80 Blastp_CBE 69.8484% 12 - C7 -1XV9 5.4 RXRA_HUMAN
114 Blastp_CBE 69.7783%-160 - C7 -1H9U 9.8 RXRB_HUMAN
79 Blastp_CBE 69.7784% 7 - C7 -1XVP 5.4 RXRA_HUMAN
28 Blastp_CBE 69.6783%-164 - C7 -4N8R Error ?
116 Blastp_CBE 69.4676%-127 - C7 -1XIU 8.2 RXR_BIOGL
66 Blastp_CBE 69.3284% 14 - C7 -1FM6 8.1 RXRA_HUMAN
113 Blastp_CBE 69.2983%-156 - C7 -1H9U 9.9 RXRB_HUMAN
39 Blastp_CBE 68.8683%-119 - C7 -3R2A 3.7 RXRA_HUMAN
160 HHSearch 68.6485%-141 - C7 -1XIU 8.1 RXR_BIOGL
27 Blastp_CBE 68.5383%-165 - C7 -4N8R 8.0 ?
67 Blastp_CBE 68.5084%-123 - C7 -3FC6 7.9 RXRA_HUMAN
65 Blastp_CBE 68.4184% 13 - C7 -1FM6 8.5 RXRA_HUMAN
11 PsiBlast_PDB 67.9583%-164 - C7 -4N5G 8.4 RXRA_HUMAN
12 PsiBlast_PDB 67.9083%-154 - C7 -4N8R 8.2 RXRA_HUMAN
7 PsiBlast_PDB 67.9083%-160 - C7 -5ZQU 3.9 ?
37 Blastp_CBE 67.5983%-130 - C7 -3R2A 3.8 RXRA_HUMAN
30 Blastp_CBE 66.7483%-159 - C7 -4N5G 8.1 ?
22 Blastp_CBE 66.7184%-160 - C7 -5ZQU 4.1 ?
62 Blastp_CBE 65.6184% 10 - C7 -1G5Y 6.3 RXRA_HUMAN
118 Blastp_CBE 65.5170%-159 - C7 -4OZT 2.9 ?
63 Blastp_CBE 64.6284% 19 - C7 -1G5Y 6.6 RXRA_HUMAN