@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Z_NR2B2_RXRBB: (2019-06-04 )
MNSLPPSTSAVSSPVSSVDSPLSAVSSSIGSPGVPGTPSIGYGPISNSQINSSMSVSRLHAVSSSDDVKPPFGLKSVSGSGPMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQKNKERDGDYECSSSANEEMPVEKILEAETAVEHRTDLHSDATGSPNDPVTNICQAADKQLFTLVEWAKRVPHFSDVPLDDQVILLRAGWNELLIAAFSHRSISVKDEILLATGLHVPKESTHNLGVEAFFDRESSHSAEVGALFDRVLTELVCKMRDMQMDKTELGCLRAIVLFNPDAKGLTSSSEVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGNTPIDTFLMEMLESPH

Atome Classification :

(96 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_D_6(4N8R)
?
[Raw transfer]




K08_A_5(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
?
[Raw transfer]




2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]




3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]




BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]




3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]




BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]




9RA_A_3(4K6I)
?
[Raw transfer]




REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]




3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]




5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]




4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]




BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]




4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]




R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]




2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]




BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]




29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]




3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]




2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]




HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]




3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]




7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]




BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]




4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]




P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]




REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




5LO_A_3(5EC9)
?
[Raw transfer]




L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]




I5W_C_7(5MK4)
?
[Raw transfer]




9RA_A_5(3H0A)

[Raw transfer]




1O8_A_3(4K4J)
?
[Raw transfer]




REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]




REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]




21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]




REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]




I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]




REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]




REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]




9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]




LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]




9CR_L_12(6A5Z)
?
[Raw transfer]




9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]




REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]




9CR_D_10(6A5Z)
?
[Raw transfer]




9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]




754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]




OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]




2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]




2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]




7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]




LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]




REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]




LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]




SJZ_A_3(5MMW)

[Raw transfer]




LG2_D_13(1H9U)

[Raw transfer]




F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]




F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]




9CR_D_7(6A5Y)
?
[Raw transfer]




REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]




F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]




9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]




MEI_F_6(1UHL)

[Raw transfer]




TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]




F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]




REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]




T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]




MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]




MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]




LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]




BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]




9HF_C_15(5ZQU)
?
[Raw transfer]




K08_D_6(4N8R)
?
[Raw transfer]




K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]




K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]




REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]




BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]




REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]




K09_D_6(4N5G)
?
[Raw transfer]




RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]




RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]




9HF_A_6(5ZQU)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




NEQ_U_4(4OZT)
?
[Raw transfer]




9HF_D_19(5ZQU)
?
[Raw transfer]




4 PsiBlast_PDB 88.7576%-134 - C6 -5UAN 7.3 RXRA_HUMAN
1 PsiBlast_PDB 87.1071%-122 - C6 -3DZU 7.3 RXRA_HUMAN
2 PsiBlast_PDB 86.2171%-122 - C6 -3E00 7.8 RXRA_HUMAN
108 Blastp_CBE 76.2677%-143 - C6 -1UHL 5.8
43 Blastp_CBE 76.1978%-127 - C6 -1MZN 9.8 RXRA_HUMAN
52 Blastp_CBE 75.9778%-128 - C6 -1XDK 7.6 RXRA_MOUSE
15 PsiBlast_PDB 75.9677%-125 - C6 -1MZN 9.9 RXRA_HUMAN
90 Blastp_CBE 75.8178%-122 - C6 -5Z12 7.5 RXRA_HUMAN
51 Blastp_CBE 75.6678%-128 - C6 -1XDK 7.7 RXRA_MOUSE
59 Blastp_CBE 75.5978%-136 - C6 -3OZJ 3.0 RXRA_HUMAN
32 Blastp_CBE 75.2678%-128 - C6 -3R5M 7.3 RXRA_HUMAN
41 Blastp_CBE 75.1678%-127 - C6 -2ZY0 9.2 RXRA_HUMAN
31 Blastp_CBE 75.1578%-138 - C6 -3R5M 6.6 RXRA_HUMAN
107 Blastp_CBE 74.9877%-134 - C6 -5MJ5 9.5 RXRA_HUMAN
40 Blastp_CBE 74.9378%-127 - C6 -2ZY0 9.3 RXRA_HUMAN
104 Blastp_CBE 74.8977%-131 - C6 -5MMW 8.5
103 Blastp_CBE 74.7777%-138 - C6 -3PCU 4.5 RXRA_HUMAN
14 PsiBlast_PDB 74.6277%-130 - C6 -1MVC 10.3 RXRA_HUMAN
102 Blastp_CBE 74.5977%-137 - C6 -5MKJ 8.6 RXRA_HUMAN
60 Blastp_CBE 74.5878%-128 - C6 -3OZJ 4.0 RXRA_HUMAN
18 PsiBlast_PDB 74.5577%-133 - C6 -2P1V 10.2 RXRA_HUMAN
95 Blastp_CBE 74.5478%-131 - C6 -4POJ 9.1 RXRA_HUMAN
42 Blastp_CBE 74.5478%-128 - C6 -1MZN 10.0 RXRA_HUMAN
56 Blastp_CBE 74.5278%-136 - C6 -6A5Z 9.1 ?
88 Blastp_CBE 74.4978%-133 - C6 -1DKF 7.3 RXRA_MOUSE
19 PsiBlast_PDB 74.4877%-134 - C6 -3FUG 9.8 RXRA_HUMAN
30 Blastp_CBE 74.4378%-127 - C6 -4ZSH 8.2 RXRA_HUMAN
55 Blastp_CBE 74.3978%-133 - C6 -1RDT 9.8 RXRA_HUMAN
100 Blastp_CBE 74.3478%-131 - C6 -4K4J 8.5 ?
16 PsiBlast_PDB 74.3277%-137 - C6 -2P1T 9.7 RXRA_HUMAN
29 Blastp_CBE 74.2978%-128 - C6 -5LYQ 10.6 RXRA_HUMAN
17 PsiBlast_PDB 74.2877%-141 - C6 -2P1U 10.1 RXRA_HUMAN
44 Blastp_CBE 74.2578%-130 - C6 -1MZN 9.9 RXRA_HUMAN
106 Blastp_CBE 74.1677%-126 - C6 -5MK4 9.5 RXRA_HUMAN
20 PsiBlast_PDB 74.1677%-138 - C6 -2ZXZ 9.3 RXRA_HUMAN
92 Blastp_CBE 74.1278%-133 - C6 -4RFW 8.1 RXRA_HUMAN
7 PsiBlast_PDB 74.0577%-131 - C6 -4OC7 7.7 RXRA_HUMAN
96 Blastp_CBE 74.0278%-131 - C6 -4POH 8.3 RXRA_HUMAN
57 Blastp_CBE 74.0178%-125 - C6 -6A5Z 8.8 ?
53 Blastp_CBE 74.0178%-125 - C6 -3UVV 7.9 RXRA_HUMAN
94 Blastp_CBE 73.9278%-127 - C6 -4PP3 8.9 RXRA_HUMAN
99 Blastp_CBE 73.9178%-127 - C6 -4K6I 9.5 ?
97 Blastp_CBE 73.8878%-128 - C6 -4M8H 8.5 RXRA_HUMAN
82 Blastp_CBE 73.8678%-127 - C6 -4RME 9.5 RXRA_HUMAN
13 PsiBlast_PDB 73.8577%-127 - C6 -1MV9 9.0 RXRA_HUMAN
8 PsiBlast_PDB 73.7977%-134 - C6 -3E94 5.9 RXRA_HUMAN
101 Blastp_CBE 73.7878%-127 - C6 -3OAP 7.3 RXRA_HUMAN
110 Blastp_CBE 73.7577%-136 - C6 -5EC9 10.3 ?
98 Blastp_CBE 73.7178%-133 - C6 -4M8E 8.5 RXRA_HUMAN
9 PsiBlast_PDB 73.6577%-138 - C6 -3KWY 7.5 RXRA_HUMAN
83 Blastp_CBE 73.6078%-126 - C6 -4RMD 10.0 RXRA_HUMAN
91 Blastp_CBE 73.5078%-124 - C6 -4RMC 8.3 RXRA_HUMAN
58 Blastp_CBE 73.3978%-132 - C6 -6A5Y 8.8 ?
93 Blastp_CBE 73.2278%-127 - C6 -4PP5 9.2 RXRA_HUMAN
46 Blastp_CBE 72.8478%-114 - C6 -1FBY 8.1 RXRA_HUMAN
111 Blastp_CBE 72.5074%-112 - C6 -1XIU 8.2 RXR_BIOGL
71 Blastp_CBE 72.4777%-117 - C6 -5JI0 7.1 RXRA_HUMAN
141 HHSearch 72.4087%-145 - C6 -4ZSH 8.2 RXRA_HUMAN
144 HHSearch 72.3988%-155 - C6 -5EC9 10.2 ?
45 Blastp_CBE 72.1178%-119 - C6 -1FBY 8.1 RXRA_HUMAN
138 HHSearch 71.9484%-115 - C6 -3H0A 8.1
89 Blastp_CBE 71.8178%-135 - C6 -5Z12 8.1 RXRA_HUMAN
28 Blastp_CBE 71.6878%-140 - C6 -4N5G Error ?
114 Blastp_CBE 70.7376%-148 - C6 -1H9U 8.8 RXRB_HUMAN
116 Blastp_CBE 70.5676%-151 - C6 -1H9U 9.7 RXRB_HUMAN
109 Blastp_CBE 70.5178%-108 - C6 -3H0A 8.1
25 Blastp_CBE 70.3078%-157 - C6 -4N8R Error ?
112 Blastp_CBE 70.1774%-122 - C6 -1XIU 8.1 RXR_BIOGL
113 Blastp_CBE 70.1376%-146 - C6 -1H9U 8.9
115 Blastp_CBE 70.0676%-147 - C6 -1H9U 9.8 RXRB_HUMAN
26 Blastp_CBE 70.0678%-154 - C6 -4N8R Error ?
6 PsiBlast_PDB 69.5978%-109 - C6 -3A9E 9.2 RXRA_MOUSE
145 HHSearch 69.4583%-135 - C6 -1XIU 8.2 RXR_BIOGL
24 Blastp_CBE 69.2778%-156 - C6 -4N8R 8.0 ?
48 Blastp_CBE 69.0378%-146 - C6 -5ZQU 7.8 ?
36 Blastp_CBE 68.9178%-114 - C6 -3R2A 3.8 RXRA_HUMAN
49 Blastp_CBE 68.7578%-142 - C6 -5ZQU 3.5 ?
50 Blastp_CBE 68.7178%-152 - C6 -5ZQU 3.9 ?
27 Blastp_CBE 68.1578%-153 - C6 -4N5G 8.1 ?
10 PsiBlast_PDB 68.0577%-157 - C6 -4N5G 8.4 RXRA_HUMAN
11 PsiBlast_PDB 67.8977%-147 - C6 -4N8R 8.2 RXRA_HUMAN
34 Blastp_CBE 67.6778%-123 - C6 -3R2A 3.8 RXRA_HUMAN
105 Blastp_CBE 67.5877% -46 - C6 -5MK4 9.5 ?
47 Blastp_CBE 67.3578%-151 - C6 -5ZQU 4.1 ?
118 Blastp_CBE 67.2466%-149 - C6 -4OZT 2.2 ?
54 Blastp_CBE 67.2378%-117 - C6 -3FC6 7.8 RXRA_HUMAN
81 Blastp_CBE 67.0478% -1 - C6 -1XV9 5.8 RXRA_HUMAN
80 Blastp_CBE 66.9278% -2 - C6 -1XV9 5.3 RXRA_HUMAN
79 Blastp_CBE 66.7278% -2 - C6 -1XVP 5.2 RXRA_HUMAN
68 Blastp_CBE 66.6878% -0 - C6 -1FM9 8.7 RXRA_HUMAN
70 Blastp_CBE 66.6378% -2 - C6 -1FM6 7.8 RXRA_HUMAN
65 Blastp_CBE 66.6178% 1 - C6 -1K74 7.8 RXRA_HUMAN
78 Blastp_CBE 66.5178% 1 - C6 -1XVP 5.9 RXRA_HUMAN
69 Blastp_CBE 65.8378% -6 - C6 -1FM6 8.6 RXRA_HUMAN
66 Blastp_CBE 64.5478% -14 - C6 -1G5Y 6.3 RXRA_HUMAN
67 Blastp_CBE 62.0178% -6 - C6 -1G5Y 6.6 RXRA_HUMAN