@TOME V2.2
(Nov 2016)
Ref.
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : S35E4_HUMAN: (2015-12-10 )
MCRCPPEHHDGRMTSAEVGAAAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPLLLSALHMLVAALACHRGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAACSLAGEFRTPPTGCGFLLAATCLRGLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPTAGDSRLWACILLSCLLSVLYNLASFSLLALTSALTVHVLGNLTVVGNLILSRLLFGSRLSALSYVGIALTLSGMFLYHNCEFVASWAARRGLWRRDQPSKGL
Atome Classification :
(20 SA)
-------------------------------------.........10...-.-....20.-......--.30...--------.....40.....-----------...50........60.-------.......70....----....80...------------.----....90..----......100.......110......-----.120-....---------------...130.....----..140..--------.....150......-------------..160..------......170.-------......180-.......190....-------------...200-----------------...-----.....210.......220.......230.......240......-.250-......--.--------.-----260.....---------..270-------------...-....280-...-..--------..290.......-----------300.-----.----.....310...-----..--..---320-----.-....-..330-------........340.......350----------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------MCRCPPEHHDGRMT-
S
-
A
EVGAAA-GGAQAA--GPPEWP--------PGS
P
Q
A
L
RQPG
R
-----------
A
R
V
A
M
A
A
L
V
W
L
LAGA
S
-------
M
S
S
LN
K
W
I
F
T
VHG----FG
R
P
L
L
L
S
A
------------
L
----
H
M
L
V
A
A
L
A
----
C
HRGARRPMPGG
T
R
C
R
V
L
L
L
S
L
TFG-----TSMA-CGNV---------------GLRAV
P
L
D
L
A
Q
----
L
V
TTT
T
P
--------
L
F
T
L
A
L
-
S
A
L
L
LGR-------------RHH-
P
L
Q
------
L
AAMG
P
L
C
L
G
-------
A
A
C
S
LAGEF-RTPPTG
C
G
F
L
L
A
A
T
-------------
C
L
R
G
L
------------------
K
S
V
-----
Q
Q
S
A
L
L
Q
E
ERL
D
A
V
T
L
L
YATSL
P
S
F
C
L
L
A
G
A
A
L
V
L
EAGVAPPPT-AG-D-
S
R
L
W
A
C
--
I
--------
L
-----
L
S
C
L
L
S
V
L
---------
Y
N
L
A
S
-------------
F
S
L
-
L
A
L
T
S
A
L
-
T
V
H
-
V
L--------GN
L
T
V
V
G
N
L
I
L
S
-----------
R
L
L
F
-----
G
----
S
R
L
S
A
L
S
Y
V
G
I
-----
A
L
--
T
L
---
S
G
M
-----
F
-
L
YHN-
C
E
F
V
--------
A
S
W
A
A
RRGLWRRDQPSKGL------------------------------------
18
Fugue
95.21
19%
-121
* C1 *
1HBN
4
MCRB_METTM
B:
[1-442]
----AKFE
D
K
V
D
L
Y
D
DRGNLVEEQVPLEALSPLRN
P
A
I
K
S
I
V
Q
G
I
K
R
T
V
A
V
N
L
-
E
G
I
E
N
A
L
-
K
T
A
K
V
G
--
G
P
A
C
K
I
--------
M
G
R
E
L
D
L
D
I
V
G
N
-----------
A
E
S
I
A
A
A
A
K
E
M
I
---
Q
-------
V
T
E
D
D
D
T
N
V
E
L
L
G
----
G
G
K
R
A
L
V
Q
V
P
S
A
R
F
D
V
AAEYS
A
----
A
P
L
V
T
A
T
A
----
F
V
Q
A
I
I
N
E
F
D
V
S
M
Y
D
A
N
M
V
K
A
A
V
L
G
RYPQS
V
E
Y
M
-
G
A
N
I
ATMLDIPQKLEGPGY
A
L
R
N
I
M
V
N
H
V
V
----
A
A
T
L
K
N
T
--------
L
Q
A
A
A
L
-
S
T
I
L
E
Q
T
A
M
F
E
M
GDAVGAF
E
R
M
H
-
L
L
G
------
L
A
Y
Q
G
M
N
A
D
N
-------
L
V
F
D
L
V
K
A
N
-
G
K
E
G
T
-
V
G
S
V
I
A
D
L
-------------
V
E
R
A
L
------------------
E
D
--------
G
V
I
K
V
E
K
E
L
T
D
Y
K
V
Y
G
T
D
D
L
A
M
W
N
A
Y
A
A
A
G
L
M
A
A
T
M
V
N
Q
G
A
A
R
A
A
-
Q
-
G
V
S
S
T
L
--
L
--------
Y
-----
Y
N
D
L
I
E
F
E
---------
T
G
L
P
S
-------------
V
D
F
G
K
V
E
G
T
A
V
-
G
F
S
-
F
F
S
H
SIYGGG
G
P
G
I
F
N
G
N
H
I
V
T
-----------
R
--------
H
----
S
K
G
F
A
I
P
C
V
A
A
-----
A
M
--
A
L
DAG
T
Q
M
-----
F
S
P
E
A
T
-
S
G
L
I
--------
K
E
V
F
S
Q
V
D
E
F
R
--
E
P
L
K
Y
V
V
E
A
A
A
E
I
K
NEI-------------------------
21
Fugue
76.87
15%
-118
- C2 -
4D10
-
CSN3_HUMAN
C:
[3-403]
-------------------------------S
A
L
E
Q
F
V
N
S
V
R
Q
L
S
A
Q
G
Q
M
T
-
Q
-
L
C
E
L
I
N
K
-
S
G
E
L
L
A
--
K
N
L
S
H
L
--------
D
T
V
L
G
A
L
D
V
Q
E
H
-----------
S
L
G
V
L
A
V
L
F
V
K
F
S
M
P
S
VPDF
E
T
L
F
S
Q
V
Q
L
F
I
S
T
C
N
G
EHIR
Y
A
T
D
T
F
A
G
L
------------
C
----
H
Q
L
T
N
A
L
V
----
E
R
K
---
Q
P
L
R
G
I
G
I
L
K
Q
A
I
D
K
M
Q
M
N
-----
T
N
Q
L
-
T
S
------------------
I
H
A
D
L
C
Q
L
C
L
----
L
A
K
C
F
K
P
--------
A
L
P
Y
-
L
-
D
V
D
M
M
D
I
C
K
E
NGAYD-----
A
K
H
-
F
L
C
------
Y
Y
Y
Y
G
G
M
I
Y
T
G
L
KN
F
E
R
A
L
Y
F
Y
E
Q
A
I
-
T
T
P
A
M
A
V
S
H
I
M
L
E
S
-------------
Y
K
K
Y
I
L
V
S
L
I
L
L
G
K
V
Q
Q
L
P
KYTS
Q
I
V
-----
G
R
F
I
K
P
L
S
N
A
Y
H
E
L
A
Q
V
Y
S
T
N
N
P
S
--
E
L
R
N
L
V
N
K
H
S
E
T
F
T
R
D
N
N
-
M
G
-
L
V
K
Q
C
L
S
S
--
L
--------
Y
-----
K
K
N
I
Q
R
L
T
---------
K
T
F
L
T
-------------
L
S
L
-
Q
D
M
A
S
R
V
-
Q
L
S
G
P
Q
--------
E
A
E
K
Y
V
L
H
M
I
E
D
-----------
G
E
I
F
-----
A
----
S
I
N
Q
K
D
G
M
V
S
F
H
DNPE
K
Y
--
N
N
---
P
A
M
-----
L
-
H
N
I
D
-
Q
E
M
L
--------
K
C
I
E
L
D
E
R
L
K
A
M
D
Q
E
I
T
V
N
PQF---------------------------------
19
Fugue
75.40
12%
-102
* C3 *
1BJ4
1
GLYC_HUMAN
A:
[1-470]
DA
D
L
W
S
S
H
D
A
M
L
A
QPLKDSD
V
E
V
Y
N
I
I
K
K
E
S
N
R
Q
R
V
G
L
E
L
I
A
S
E
N
F
A
S
R
A
V
-
L
-
E
A
L
G
S
C
L
-
N
N
K
Y
S
E
--
G
Y
P
G
Q
R
--------
Y
Y
G
G
T
E
F
I
D
E
L
E
-----------
T
L
C
Q
K
R
A
L
Q
A
Y
K
L
D
P
Q
-------
C
W
G
V
N
V
Q
P
Y
S
G
S
P
----
A
N
F
A
V
Y
T
A
L
------------
V
EPH
G
R
I
M
G
L
D
L
P
DGGH
L
T
H
G
F
M
T
D
K
K
K
I
S
A
T
S
I
F
F
E
S
M
P
Y
K
-----
V
N
P
D
-
T
G
Y
I
---------------
N
Y
D
Q
L
E
E
N
A
R
L
F
HPK
L
I
I
A
G
T
S
--------
C
Y
S
R
N
L
-
E
Y
A
R
L
R
K
-------------
I
A
D
-
E
N
G
------
A
Y
L
M
A
D
M
A
H
I
-------
S
G
L
V
A
A
G
V
V
-
P
S
P
F
E
H
C
H
V
V
T
T
T
T
HKTLRG
C
R
A
G
M
I
F
Y
R
K
G
V
------------------
K
S
V
DPATG
K
E
I
L
Y
N
L
E
S
L
I
N
S
A
V
F
P
G
L
Q
G
G
P
H
N
H
A
I
A
G
V
A
V
A
L
K
Q
A
M
T
L
E
F
K
-
V
Y
-
Q
-
H
Q
V
V
A
N
C
R
A
--------
L
-----
S
E
A
L
T
E
L
G
---------
Y
K
I
V
T
GGSDNH
L
------
I
L
V
-
D
L
R
S
K
G
T
-
D
G
G
-
R
A
--------
E
K
V
L
E
A
C
S
I
A
C
N
-----------
K
N
T
C
PGDRS
A
----
L
R
P
S
G
L
R
L
G
T
P
-----
A
L
--
T
S
---
R
G
L
L
E
K
--
D
-
F
Q
K
V
-
A
H
F
I
--------
H
R
G
I
E
L
T
L
Q
I
Q
S
D
T
G
V
A
A
T
L
K
E
F
K
E
R
L
A
GDKY
Q
A
A
V
Q
A
L
R
E
E
V
E
S
F
A
S
L
F
PLPGL
25
Fugue
74.50
18%
-98
- C2 -
4UQU
10
?
A:
[1-462]
----------------------AEKEKN
A
A
E
I
R
Q
Q
F
A
M
T
A
G
S
P
I
I
V
N
D
K
L
E
-
R
Y
A
E
V
R
T
A
F
-
T
H
P
T
S
F
--
F
K
P
N
Y
K
GEVKP
W
F
L
S
A
Y
D
E
K
V
R
Q
I
E
N
GENGPKMKAKN
V
G
E
A
R
A
G
R
A
L
E
A
A
G
W
T
-------
L
D
I
N
Y
G
N
I
Y
P
N
R
F
----
F
---
M
L
W
S
G
------------
E
----
T
M
T
N
T
Q
L
W
----
A
P
V
G
L
D
R
R
P
P
D
T
T
D
P
V
E
L
T
N
Y
V
K
F
A
-----
A
R
M
A
G
A
D
L
V
---------------
G
V
A
R
L
N
R
N
W
V
Y
----
S
E
A
V
T
I
P
ADVPYEQS
L
H
K
E
I
E
-
K
P
I
V
F
K
D
-------------
V
P
L
-
P
I
E
T
DDELI
I
P
N
T
C
E
N
V
I
V
-------
A
G
I
A
M
N
R
E
M
M
Q
T
A
P
N
S
M
A
C
A
T
T
A
F
-------------
C
Y
S
R
M
------------------
C
M
F
-----
D
M
W
L
C
Q
F
I
R
Y
M
G
Y
Y
A
I
P
S
C
N
G
V
G
-----
Q
S
V
A
F
A
V
E
A
G
L
G
Q
A
--------
S
R
M
G
A
C
--
I
TPEFGPN
V
R
-----
L
T
K
V
F
T
N
M
P
L
V
P
D
K
P
I
D
F
G
V
T
E
-------------
F
C
E
-
T
C
K
K
C
A
R
-
E
C
P
-
S
K
AITE----
G
P
R
T
F
E
G
R
S
I
H
N
QSGKLQWQND
Y
N
K
C
L
-----
G
----
Y
W
P
E
S
G
G
Y
C
G
V
-----
C
V
--
A
V
---
C
P
F
TKGNI
W
-
I
H
D
G
-
V
E
W
L
I
DNTRN
I
T
E
V
W
D
G
K
I
N
T
Y
G
L
D
A
D
H
F
R
D
TVSFRKDRVK--------------------------
23
Fugue
73.82
20%
-86
- C3 -
4PX7
2
?
A:
[1-258]
------------------------------------------
G
R
S
I
A
R
R
T
A
-
V
-
G
A
A
L
L
L
V
M
P
V
A
V
W
I
--
S
G
W
R
W
Q
--------
P
G
S
W
--
L
L
K
A
A
F
-----------
W
V
T
E
T
V
T
Q
P
W
--
G
V
I
T
-------
H
L
I
L
F
G
W
F
L
W
C
L
R
----
F
R
I
K
A
A
F
V
L
------------
F
----
A
I
L
A
A
A
I
L
----
V
G
Q
G
V
K
S
W
I
K
D
K
V
Q
--------------------------------------------
E
P
R
P
F
V
I
----
W
L
E
K
T
--------------------------------------
H
H
M
P
------------------------------
V
D
K
F
-
Y
T
-----------------------------
L
------------------
K
R
A
-----
E
R
G
N
L
V
K
E
Q
L
A
E
P
-------------
Q
Y
L
R
S
H
W
Q
K
E
T
G
F
A
F
P
S
G
-
H
T
M
F
-
A
A
S
W
A
L
--
L
--------
A
-----
V
G
L
L
W
P
R
R
---------
R
T
L
T
I
-------------
A
I
L
-
L
V
W
A
T
G
V
M
G
------------------------
S
-----------
R
L
L
L
-----
G
MHW
P
R
D
L
V
V
A
T
L
I
S
W
-----
A
L
--
V
A
---
V
A
T
-----
W
-
L
A
Q
R
I
C
G
P
L
--------
T
P
P
E
E
N
R
E
I
A
Q
R
E
Q
E
S
L
E
H
H-----------------------------------
2
PsiBlast_PDB
61.62
22%
-82
- C4 -
1NFF
1
HSD_MYCTU
A:
[131-242]
----------------------------------------------------------------------------------------------------------------------------------------------
G
----
R
G
S
I
I
N
I
S
S
------------
I
----
E
G
L
A
G
T
V
A
----
C
H
--------
G
Y
T
A
T
K
F
A
V
R
G
L
T
K
S
-----
T
A
L
E
-
L
G
P
S
---------------
G
I
R
V
N
S
I
H
P
G
L
----
V
K
T
P
M
T
D
--------
W
V
P
E
D
I
-
F
Q
T
A
L
G
R
-------------
A
A
E
-
P
V
E
------
V
S
N
L
--------------
V
V
Y
L
A
S
D
E
-
S
S
Y
S
T
G
A
E
F
V
V
D
G
G
-------------
T
V
A
G
L
------------------
A
H
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
59.16
22%
-81
- C4 -
1NFR
1
HSD_MYCTU
A:
[131-242]
----------------------------------------------------------------------------------------------------------------------------------------------
G
----
R
G
S
I
I
N
I
S
S
------------
I
----
E
G
L
A
G
T
V
A
----
C
H
--------
G
Y
T
A
T
K
F
A
V
R
G
L
T
K
S
-----
T
A
L
E
-
L
G
P
S
---------------
G
I
R
V
N
S
I
H
P
G
L
----
V
K
T
P
M
T
D
--------
W
V
P
E
D
I
-
F
Q
T
A
L
G
R
-------------
A
A
E
-
P
V
E
------
V
S
N
L
--------------
V
V
Y
L
A
S
D
E
-
S
S
Y
S
T
G
A
E
F
V
V
D
G
G
-------------
T
V
A
G
L
------------------
A
H
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
58.58
22%
-85
* C4 *
1NFQ
2
HSD_MYCTU
A:
[131-242]
----------------------------------------------------------------------------------------------------------------------------------------------
G
----
R
G
S
I
I
N
I
S
S
------------
I
----
E
G
L
A
G
T
V
A
----
C
H
--------
G
Y
T
A
T
K
F
A
V
R
G
L
T
K
S
-----
T
A
L
E
-
L
G
P
S
---------------
G
I
R
V
N
S
I
H
P
G
L
----
V
K
T
P
M
T
D
--------
W
V
P
E
D
I
-
F
Q
T
A
L
G
R
-------------
A
A
E
-
P
V
E
------
V
S
N
L
--------------
V
V
Y
L
A
S
D
E
-
S
S
Y
S
T
G
A
E
F
V
V
D
G
G
-------------
T
V
A
G
L
------------------
A
H
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
55.58
10%
-118
- C1 -
1X8M
-
KDUI_ECOLI
A:
[1002-1268]
----------------------------------------------------------------------
S
L
D
V
R
Q
--------
S
I
H
S
A
H
A
K
T
L
D
T
-----------
Q
G
L
R
N
E
F
L
V
E
K
V
F
V
A
D
-------
E
Y
---
T
M
V
Y
S
H
I
D
-------
R
I
I
V
G
G
------------
I
----
M
P
I
T
K
T
V
S
----
V
G
G
E
V
G
K
Q
L
---------------
G
-----
V
S
Y
F
-
L
E
R
R
---------------
E
L
G
V
I
N
I
G
G
A
G
----
T
I
T
V
D
G
Q
--------
C
Y
E
I
G
H
R
D
A
L
Y
V
G
K
-------------
G
A
K
-
E
V
V
------
F
A
S
I
D
T
G
T
P
A
-------
K
F
Y
Y
N
C
A
P
A
-
H
T
T
Y
P
T
K
K
V
T
P
D
E
V
-------------
S
P
V
T
L
------------------
G
D
N
-----
L
T
S
N
-----
R
R
T
I
N
K
Y
F
V
P
D
V
L
E
T
C
Q
L
S
M
G
L
T
E
L
------
A
P
G
N
-
L
W
-
N
-
T
R
M
E
V
Y
--
F
--------
Y
-----
F
N
--------------------------------------
M
D
D
D
A
C
-
V
F
H
-
M
M
--------
G
Q
P
Q
E
T
R
H
I
V
M
H
-----------
N
E
----------------------------
Q
A
--
V
I
---
S
P
S
-----
W
-
S
I
H
S
-
G
V
G
T
--------
K
A
Y
T
F
I
W
G
M
V
G
E
N
Q
V
F
---------------------------------------
6
PsiBlast_PDB
54.68
26%
-137
- C- -
4B6E
-
POLG_HCVBK
A:
[595-679]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
A
Y
Q
A
T
V
C
A
R
A
Q
A
P
P
P
S
-
W
----
D
Q
M
W
K
C
--
L
--------
I
RLKPT
L
H
G
P
T
P
L
L
---------
Y
R
L
G
A
VQNEVTLTH
P
I
T
K
Y
I
M
-
A
C
M
S
A
D
L
-
E
V
V
-
T
L
--------
G
S
V
V
I
V
G
R
I
I
L
S
-----------
G
S
G
S
---------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
53.76
26%
-135
- C- -
4B6F
1
POLG_HCVBK
A:
[595-679]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
A
Y
Q
A
T
V
C
A
R
A
Q
A
P
P
P
S
-
W
----
D
Q
M
W
K
C
--
L
--------
I
RLKPT
L
H
G
P
T
P
L
L
---------
Y
R
L
G
A
VQNEVTLTH
P
I
T
K
Y
I
M
-
A
C
M
S
A
D
L
-
E
V
V
-
T
L
--------
G
S
V
V
I
V
G
R
I
I
L
S
-----------
G
S
G
S
---------------------------------------------------------------------------------------------------------------------
12
HHSearch
43.63
14%
-88
- C- -
3B5D
1
EMRE_ECOLI
A:
[29-105]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
W
P
S
V
G
T
I
I
C
Y
C
-----
A
S
F
W
-
L
L
A
Q
---------------
T
L
A
Y
I
P
T
G
I
A
Y
A
---
I
W
S
G
V
G
I
--------
V
L
I
S
L
L
-
S
W
G
F
F
G
Q
-------------
R
L
D
-
L
P
A
------
I
I
G
M
M
L
I
C
A
G
-------
V
L
I
I
N
L
L
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
43.21
15%
-162
- C- -
3B5D
1
EMRE_ECOLI
A:
[29-105]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
W
P
--
S
--------
V
-----
G
T
I
I
C
Y
C
A
---------
S
F
W
L
L
-------------
A
Q
T
-
L
A
Y
I
P
T
G
-
I
A
Y
A
I
W
--------
S
G
V
G
I
V
L
I
S
L
L
S
-----------
W
G
F
F
-----
G
----
Q
R
L
D
L
P
A
I
I
G
M
-----
M
L
--
I
C
---
A
G
V
-----
L
-
I
I
N
L
-
L
S
-----------------------------------------------------------------
26
Fugue
36.45
14%
3
* C2 *
2L01
-
?
A:
[1-77]
-----------------------------------------------
M
K
M
L
-
K
-
E
K
A
G
A
L
A
-
G
Q
I
W
E
A
L
N
G
T
E
G
L
T
--------
Q
K
Q
I
K
K
A
T
K
L
K
A
-----------
D
K
D
F
F
L
G
L
G
W
L
L
R
E
D
K
-------
V
V
T
S
E
V
E
G
E
I
F
V
K
----
L
V
L
E
H
H
H
H
H
------------
H
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
34.96
36%
4
- C4 -
1O8C
2
ACUI_ECOLI
A:
[259-321]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
C
G
L
A
G
G
F
-
T
L
P
T
T
V
M
P
F
I
L
R
N
V
-------------
R
L
Q
G
V
------------------
D
S
V
-----
M
T
P
P
---
E
R
R
A
Q
A
W
Q
R
L
V
A
D
L
P
E
S
F
Y
T
Q
A
A
K
E
I
S
L
S
E
A
P
N
F
A
E
A
-
I
I
-
N
-
N
Q
I
Q
G
R
--
T
--------
L
-----
V
K
V
N
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
34.75
36%
4
- C4 -
1O89
-
ACUI_ECOLI
A:
[238-300]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
C
G
L
A
G
G
F
-
T
L
P
T
T
V
M
P
F
I
L
R
N
V
-------------
R
L
Q
G
V
------------------
D
S
V
-----
M
T
P
P
---
E
R
R
A
Q
A
W
Q
R
L
V
A
D
L
P
E
S
F
Y
T
Q
A
A
K
E
I
S
L
S
E
A
P
N
F
A
E
A
-
I
I
-
N
-
N
Q
I
Q
G
R
--
T
--------
L
-----
V
K
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
27.84
48%
32
- C4 -
3NX4
2
?
A:
[238-268]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
C
G
L
A
G
G
F
-
A
L
P
T
T
V
M
P
F
I
L
R
N
V
-------------
R
L
Q
G
V
------------------
D
S
V
-----
M
T
P
P
A
R
R
A
E
A
W
A
R
L
V
K
D
L
P
E
S
F
Y
A
Q
A
A
T
E
I
T
L
A
D
A
P
K
F
A
D
A
I
I
N
-
N
Q
-
V
-
Q
G
R
T
L
V
--
K
--------
I
-----
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
14.13
26%
102
- C4 -
3RKO
-
?
J:
[133-165]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
F
-----
G
----
P
Y
V
L
A
V
E
L
A
S
M
-----
L
L
LA
G
L
---
V
V
A
-----
F
-
H
V
G
R
-
E
E
R
A
--------
G
E
V
L
---------------------------------------------------
16
HHSearch
6.63
14%
318
- C4 -
2JO1
-
PLM_HUMAN
A:
[24-37]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
G
-----
I
L
--
F
I
---
L
G
I
-----
L
-
I
V
L
S
-
R
R
C
R
--------
C
K
F
N
Q
Q
Q
R
T
G
E
P
D
E
E
E
G
T
F
------------------------------------
14
HHSearch
5.59
17%
299
- C4 -
2ZXE
-
?
G:
[26-42]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
A
A
-----
V
L
--
C
V
---
I
G
I
-----
I
-
I
L
L
A
-
G
K
-----------------------------------------------------------------