@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : T0821: (2014-06-16 )
MRTFLIIIGLFLFIGNSFAQSYEELIEKSYDFVDKGDLVSAEESLKAAMRKEPANPLNYALLTNLGTIQRRQGKLQEALISYTSALSGHTKNITILENRASLYTELGETEKALNDYNTLLIENPEHQEALYCRGLLYIQLQNYMWAEQDFDKILEVNEKSVRARLGHAILEKMRGNYDESERIFNYLISEMPRDWILYEGRADLYFMMGKNARAMADIEKVFTESEPTANLYVLRGKIKLAQYEKERAALDFKKAESMGYNKEVIKELLKLTMNN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_A_8(1LD8)
FNTA_HUMAN
[Raw transfer]



U49_B_6(1LD8)
FNTA_HUMAN
[Raw transfer]
31 SP3 85.3914% -35 - C1 -1W3B - OGT1_HUMAN -
46 HHSearch 83.1616% -27 - C1 -1W3B - OGT1_HUMAN -
23 Fugue 80.2315% -25 - C1 -1FCH - PEX5_HUMAN -
45 HHSearch 78.5719% -35 - C1 -3FP2 - TOM71_YEAST -
47 HHSearch 76.0317% -27 - C1 -1W3B - OGT1_HUMAN -
49 HHSearch 75.5215% -27 - C1 -3UQ3 - -
51 HHSearch 74.1115% -32 - C1 -3HYM - CDC16_HUMAN -
26 Fugue 73.7015% -27 - C1 -3PE4 - OGT1_HUMAN -
32 SP3 73.5216% -29 - C1 -1FCH - PEX5_HUMAN -
43 HHSearch 71.7017% -32 - C1 -2Y4T - DNJC3_HUMAN -
63 HHSearch 70.3311% -35 - C1 -2XPI - CUT9_SCHPO -
52 HHSearch 69.8614% -43 - C1 -3FP2 - TOM71_YEAST -
48 HHSearch 68.2316% -21 - C1 -1FCH - PEX5_HUMAN -
53 HHSearch 67.3810% -35 - C1 -3DRA - FNTA_CANAX -
21 Fugue 67.3413% -30 - C1 -2XPI - CUT9_SCHPO -
57 HHSearch 65.7312% -27 - C1 -3HYM - CDC16_HUMAN -
38 SP3 64.2613% -31 - C1 -1OUV - HCPC_HELPY -
9 PsiBlast_PDB 62.8926% -43 - C1 -1KT0 - FKBP5_HUMAN -
28 Fugue 61.3414% -39 - C1 -1FT1 - FNTA_RAT -
25 Fugue 61.0211% -34 - C1 -1FT1 - FNTA_RAT -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_A_8(1LD8)
FNTA_HUMAN
[Raw transfer]



U49_B_6(1LD8)
FNTA_HUMAN
[Raw transfer]
78 40.32100% 16 - C- -M078 - -
77 40.32100% 16 - C- -M077 - -
76 40.32100% 16 - C- -M076 - -