@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : T0858: (2014-07-16 )
MGSSHHHHHHSSGPQQGLRSNSDDAEKPVVPVPTGDVAIYTTTSSLTRDLTRDAVNFSPKDNLAPTTITLNPAEQYQTMDGFGAAITGSTCYNLLLMKPADRHAFLTETFSDKDGFGFSYIRISIGCSDFSLSEYTCCDTKGIENFALQSEEKDYILPILKEILAINPSIKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPDYYQDYATYFVKWIQAFKAEGIDIYAVTPQNEPLNRGNSASLYMEWEEQRDFVKTALGPQMKAAGLSTKIYAFDHNYNYDNIESQKNYPGKIYEDAAASQYLAGAAYHNYGGNREELLNIHQAYPEKELLFTETSIGTWNSGRDLSKRLMEDMEEVALGTINNWCKGVIVWNLMLDNDRGPNREGGCQTCYGAVDINNSDYKTIIRNSHYYIIAHLSSVVKPGAVRIATTGYTDNGITCSAFENTDGTYAFVLINNNEKSKKITVSDGQRHFAYDVPGKSVTSYRWAKSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_6(2WNW)
?
[Raw transfer]
41 HHSearch 97.4324% -78 * C7 *2NT0 - GLCM_HUMAN -
21 Fugue 95.3824% -67 - C7 -1OGS - GLCM_HUMAN -
42 HHSearch 92.3326% -88 - C7 -2WNW 4.3 ?
6 PsiBlast_PDB 91.8025% -77 - C7 -2XWD - GLCM_HUMAN -
1 PsiBlast_PDB 91.5825% -75 - C7 -2V3D - GLCM_HUMAN -
31 SP3 91.2123% -59 - C7 -1OGS - GLCM_HUMAN -
3 PsiBlast_PDB 90.7225% -76 - C7 -2V3F - GLCM_HUMAN -
5 PsiBlast_PDB 90.4325% -74 - C7 -2WCG - GLCM_HUMAN -
2 PsiBlast_PDB 90.4225% -74 - C7 -2V3E - GLCM_HUMAN -
4 PsiBlast_PDB 90.0925% -74 - C7 -2VT0 - GLCM_HUMAN -
7 PsiBlast_PDB 90.0325% -76 - C7 -2XWE - GLCM_HUMAN -
11 PsiBlast_PDB 89.8425% -72 - C7 -2J25 - GLCM_HUMAN -
19 PsiBlast_PDB 89.8125% -72 - C7 -3RIK - GLCM_HUMAN -
16 PsiBlast_PDB 89.7025% -73 - C7 -3GXF - GLCM_HUMAN -
17 PsiBlast_PDB 89.5125% -74 - C7 -3GXI - GLCM_HUMAN -
18 PsiBlast_PDB 88.9825% -73 - C7 -3GXM - GLCM_HUMAN -
15 PsiBlast_PDB 88.8825% -72 - C7 -3GXD - GLCM_HUMAN -
12 PsiBlast_PDB 88.8425% -73 - C7 -2NSX - GLCM_HUMAN -
10 PsiBlast_PDB 88.7625% -70 - C7 -2F61 - GLCM_HUMAN -
14 PsiBlast_PDB 88.7125% -74 - C7 -2NT1 - GLCM_HUMAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_6(2WNW)
?
[Raw transfer]
70 97.58100% -78 - C- -M070 - -
83 54.57100% 7 - C- -M083 - -
82 52.91100% 5 - C- -M082 - -
64 51.75100% 5 - C- -M064 - -