@TOME V2.2
(Nov 2016)

Ref. - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S27A3_HUMAN: (2015-12-10 )
MGVCQRTRAPWKEKSQLERAALGFRKGGSGMFASGWNQTVPIEEAGSMAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLKSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTGDTFRWKGENVATTEVAEVFEALDFLQEVNVYGVTVPGHEGRAGMAALVLRPPHALDLMQLYTHVSENLPPYARPRFLRLQESLATTETFKQQKVRMANEGFDPSTLSDPLYVLDQAVGAYLPLTTARYSALLAGNLRI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]
8 PsiBlast_PDB 93.4124%-102 - C1 -3GPC - ACS2A_HUMAN -
36 HHSearch 91.8423% -89 - C1 -2V7B - ? -
4 PsiBlast_PDB 91.4124%-101 - C1 -3C5E 7.1 ACS2A_HUMAN
5 PsiBlast_PDB 91.2224% -99 - C1 -3DAY 7.9 ACS2A_HUMAN
30 HHSearch 91.1822% -96 - C1 -3C5E - ACS2A_HUMAN -
3 PsiBlast_PDB 90.8324% -98 - C1 -3B7W - ACS2A_HUMAN -
9 PsiBlast_PDB 89.1424% -95 - C1 -2WD9 - ACS2A_HUMAN -
6 PsiBlast_PDB 89.0524% -96 - C1 -2VZE - ACS2A_HUMAN -
7 PsiBlast_PDB 88.4724% -94 - C1 -3EQ6 - ACS2A_HUMAN -
44 HHSearch 86.8722% -84 - C1 -1T5H - ? -
2 PsiBlast_PDB 86.1525%-100 - C1 -3R44 - FAC13_MYCTU -
23 Fugue 85.9117% -79 - C1 -1PG4 - ACSA_SALTY -
33 HHSearch 82.6119% -81 * C1 *1MDB - DHBE_BACSU -
28 HHSearch 80.8218% -83 - C1 -2VSQ - -
25 HHSearch 80.7119% -86 - C1 -3ETC - ? -
40 HHSearch 80.1420% -85 - C1 -3R44 - FAC13_MYCTU -
1 PsiBlast_PDB 80.0923% -95 - C1 -2V7B - ? -
21 Fugue 76.5316%-101 - C1 -1AMU - GRSA_ANEMI -
37 HHSearch 75.8818% -86 - C1 -3NI2 - ? -
22 Fugue 75.8516% -80 - C1 -4DG9 - ? -