@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : UT1_HUMAN: (2015-12-12 )
MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSAPFEDIYFGLWGFNSSLACIAMGGMFMALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BOG_C_(4EZD)
UT1_BOVIN
[Raw transfer]



BOG_A_8(4EZC)
UT1_BOVIN
[Raw transfer]



BGC_B_17(4EZD)
UT1_BOVIN
[Raw transfer]



BOG_C_26(4EZD)
UT1_BOVIN
[Raw transfer]



BOG_B_14(4EZC)
UT1_BOVIN
[Raw transfer]



BOG_A_8(4EZC)
UT1_BOVIN
[Raw transfer]



BOG_C_22(4EZC)
UT1_BOVIN
[Raw transfer]



BOG_C_(4EZD)
UT1_BOVIN
[Raw transfer]
24 PsiBlast_CBE 99.2279%-155 - C3 -4EZC 3.2 UT1_BOVIN
23 PsiBlast_CBE 99.1379%-153 - C3 -4EZC 2.5 UT1_BOVIN
2 PsiBlast_PDB 99.1179%-154 - C3 -4EZD 2.3 UT1_BOVIN
22 PsiBlast_CBE 99.0779%-153 - C3 -4EZD 2.6 UT1_BOVIN
21 PsiBlast_CBE 99.0579%-154 - C3 -4EZD 3.1 UT1_BOVIN
1 PsiBlast_PDB 99.0079%-154 - C3 -4EZC 2.6 UT1_BOVIN
3 PsiBlast_PDB 75.7034%-148 - C3 -3M6E - UT_DESVH -
34 Fugue 73.7833%-141 - C3 -3K3F - UT_DESVH -
43 Fugue 50.4318%-115 - C1 -2BVL - TOXB_PEPDI -
35 Fugue 47.9015%-111 - C5 -4PQG - ? -
26 HHSearch 47.8225%-131 * C3 *3K3F - UT_DESVH -
39 Fugue 45.4714%-105 - C5 -3WDO - ? -
42 Fugue 44.0111% -96 - C2 -3SLU - ? -
12 PsiBlast_PDB 44.0122%-122 - C4 -4HC1 - ? -
4 PsiBlast_PDB 32.0423% -92 - C4 -1MCO - ? -
6 PsiBlast_PDB 31.5823%-112 - C4 -3J2Z - ? -
5 PsiBlast_PDB 31.4323%-112 - C4 -3J2Y - ? -
7 PsiBlast_PDB 30.9223%-113 - C4 -4GQ9 - ? -
16 PsiBlast_PDB 30.8722% -93 * C4 *2G2R - HVM63_MOUSE -
17 PsiBlast_PDB 30.6827%-100 - C4 -4X8J - ? -