Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
SLC (Dec 2015)
Download :
Data.csv
|
3D Models
Tab legend :
Full name of ligand selected in the comparative docking column:
General color information :
Quality: [
Good
|
Correct
| Uncertain ]
Query
Structural Alignment (SA)
3D Modeling
Annotation
Ligands from PDB templates
Predicted Complexes
- pKd:[
‹nMol
|
‹μMol
|
‹mMol
]
Query Sequence
Filter:
Significants
SA found
Seq Ident.
3D Core
(QMean Score)
Classification code
Uniprot
Pfam
Prosite
Smart
Cath
ECNumber
Binding Site
Ligands Found
(Procognate)
Profile
Complexes by comparative docking
(ligands from PDB templates)
ALL
ASP - [nb=131] --> ASPARTIC ACID
CDL - [nb=22] --> CARDIOLIPIN
TB1 - [nb=21] --> .....ENZYLOXY)-L-ASPARTIC ACID
42F - [nb=6] --> ......2.1]octane-2-carboxylate
42J - [nb=5] --> .....dichlorophenyl)ethanamine
BOG - [nb=5] --> SUGAR (B-OCTYLGLUCOSIDE)
B40 - [nb=5] --> .....yl-1-phenylpropan-2-amine
41U - [nb=5] --> nisoxetine
21B - [nb=4] --> NORTRIPTYLINE
42L - [nb=4] --> ......2.1]octane-2-carboxylate
41X - [nb=4] --> .....(phenyl)methyl]morpholine
LDP - [nb=4] --> L-DOPAMINE
ATP - [nb=4] --> ADENOSINE-5'-TRIPHOSPHATE
CM5 - [nb=3] --> .....1-PENTYL-BETA-D-MALTOSIDE
COC - [nb=3] --> COCAINE
N9S - [nb=3] --> .....osyl-beta-D-glucopyranose
1WE - [nb=3] --> .....S)-1-phenylpropan-2-amine
APC - [nb=2] --> .....HONIC ACID ADENOSYL ESTER
NAG - [nb=2] --> N-ACETYL-D-GLUCOSAMINE
MAL - [nb=2] --> MALTOSE
6BG - [nb=1] --> .....EOXY-BETA-D-GLUCOPYRANOSE
OLC - [nb=1] --> .....pyl (9Z)-octadec-9-enoate
37X - [nb=1] --> ..... Glucose Neopentyl Glycol
DMU - [nb=1] --> .....YL-BETA-D-MALTOPYRANOSIDE
Y01 - [nb=1] --> CHOLESTEROL HEMISUCCINATE
Targets
for screening
Sort by entries
[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100
GTR4_HUMAN
18
64%
0.412
PF00083
15 -
(0)
2
- / - / -
0
101
MFRN1_HUMAN
6
29%
0.129
PF00153
15 -
(0)
?
- / - / -
0
102
NTCP2_HUMAN
5
33%
0.224
PF01030
15 -
(0)
?
- / - / -
0
103
S22A6_HUMAN
6
43%
0.297
PF00083
15 -
(0)
?
- / - / -
0
104
S22AA_HUMAN
3
36%
0.342
PF00083
15 -
(0)
?
- / - / -
0
105
S47A1_HUMAN
9
25%
0.228
PF03742
15 -
(0)
?
- / - / -
0
106
GTR7_HUMAN
19
43%
0.377
PF00083
15 -
(0)
?
- / - / -
0
107
S2545_HUMAN
10
30%
0.128
PF00153
15 -
(0)
?
- / - / -
0
108
NCKX6_HUMAN
3
40%
0.289
PF00180
14 -
(0)
?
- / - / -
0
109
S22A5_HUMAN
1
43%
0.213
PF07690
14 -
(0)
?
- / - / -
0
110
S39A1_HUMAN
0
41%
0.371
PF02525
14 -
(12)
?
- / - / -
0
111
S26A6_HUMAN
10
36%
0.395
PF01867
14 -
(0)
?
- / - / -
0
112
S22AV_HUMAN
6
31%
0.201
PF00083
14 -
(0)
?
- / - / -
0
113
GTR12_HUMAN
17
37%
0.362
PF07690
14 -
(0)
?
- / - / -
0
114
S29A3_HUMAN
0
36%
0.382
PF05053
13 -
(0)
?
- / - / -
0
115
S29A1_HUMAN
2
37%
0.306
PF07690
13 -
(0)
?
- / - / -
0
116
GTR1_HUMAN
20
99%
0.411
PF00083
C1_S1
13 -
(0)
2
- / - /
1
0
117
NCKX5_HUMAN
3
42%
0.274
PF01699
13 -
(0)
?
- / - / -
0
118
GTR9_HUMAN
16
38%
0.398
PF00083
C3_S1
13 -
(0)
2
- / - /
1
0
119
NTCP5_HUMAN
4
28%
0.327
PF06965
13 -
(0)
?
- / - / -
0
120
CTR4_HUMAN
7
32%
0.351
PF13520
13 -
(5)
?
- / - / -
0
121
SL9C1_HUMAN
16
38%
0.397
PF00027
13 -
(0)
?
- / - / -
0
122
4F2_HUMAN
15
100%
0.613
PF00128
12 -
(0)
?
- / - / -
0
123
S22AF_HUMAN
6
50%
0.226
PF07690
12 -
(0)
?
- / - / -
0
124
NCKX1_HUMAN
7
39%
0.168
PF01699
12 -
(0)
?
- / - / -
0
125
S22A8_HUMAN
8
43%
0.333
PF00083
12 -
(2)
?
- / - / -
0
126
S22A9_HUMAN
7
43%
0.319
PF00083
12 -
(0)
?
- / - / -
0
127
S28A3_HUMAN
10
40%
0.439
PF00584
12 -
(0)
?
- / - / -
0
128
S39AD_HUMAN
0
33%
-0.002
PF00106
12 -
(0)
?
- / - / -
0
129
S22A2_HUMAN
12
36%
0.286
PF00083
12 -
(0)
?
- / - / -
0
130
S22AB_HUMAN
5
43%
0.309
PF00083
12 -
(0)
?
- / - / -
0
131
GTR10_HUMAN
18
33%
0.348
PF00083
C2_S1
12 -
(0)
?
- / - /
1
0
132
S22A3_HUMAN
6
52%
0.248
PF00083
12 -
(0)
?
- / - / -
0
133
S28A2_HUMAN
10
38%
0.394
PF00584
12 -
(0)
?
- / - / -
0
134
S28A1_HUMAN
10
43%
0.389
PF01568
12 -
(0)
?
- / - / -
0
135
S22A1_HUMAN
4
27%
0.304
PF00083
12 -
(0)
?
- / - / -
0
136
S2546_HUMAN
6
50%
0.251
PF00153
12 -
(0)
?
- / - / -
0
137
MOT8_HUMAN
9
24%
0.244
PF07690
12 -
(0)
?
- / - / -
0
138
GTR6_HUMAN
15
35%
0.390
PF00083
12 -
(0)
?
- / - / -
0
139
CTR3_HUMAN
4
31%
0.311
PF13520
12 -
(0)
?
- / - / -
0
140
S22AH_HUMAN
7
41%
0.243
PF00083
11 -
(0)
?
- / - / -
0
141
NTCP7_HUMAN
1
45%
0.355
PF00005
11 -
(0)
?
- / - / -
0
142
NCKX4_HUMAN
3
26%
0.183
PF01699
11 -
(0)
?
- / - / -
0
143
S39A9_HUMAN
0
42%
0.122
PF03453
11 -
(0)
?
- / - / -
0
144
NTCP_HUMAN
5
40%
0.227
PF06965
11 -
(0)
?
- / - / -
0
145
P3_HUMAN
5
29%
0.297
PF06965
11 -
(0)
?
- / - / -
0
146
S22A4_HUMAN
3
43%
0.205
PF07690
11 -
(0)
?
- / - / -
0
147
S22AG_HUMAN
7
36%
0.252
PF00083
11 -
(0)
?
- / - / -
0
148
NCKX3_HUMAN
3
30%
0.206
PF01699
10 -
(0)
?
- / - / -
0
149
S22AC_HUMAN
6
35%
0.317
PF00083
10 -
(0)
?
- / - / -
0
150
S36A4_HUMAN
3
42%
0.267
PF13520
10 -
(0)
?
- / - / -
0
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